Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_I03
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.48 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 219 NNKFSEIDSRLTRQLFDKYVSLKYLNKVTADNIYYIDTYLLI 94
           N    E+D+++            Y N  +++N+YY++T  L+
Sbjct: 242 NLTLKEVDNKVYGMALSPVTHNLYYNSPSSENLYYVNTESLM 283


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 186 TRQLFDKYVSLKYLNKVTADNIYYIDTY 103
           T Q +DKY  L+ +N     N  Y+D Y
Sbjct: 112 TVQSYDKYDLLENVNNAARINWEYLDKY 139


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 124 YILYRYISSDFYYLLNVKCLLYYXINDHQISFKNSFVLHL 5
           Y +  Y+S  FYYL      L Y I  ++  F+ +F L L
Sbjct: 326 YTILTYMSGVFYYLSTTVNPLLYNIMSNK--FREAFKLML 363


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 650 HDPCGVTSL*GVP 612
           HD CGV +L G+P
Sbjct: 326 HDTCGVHNLHGMP 338


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 381 IPSVFSYDVVTFNYRQ*TDFTDNRYFFY 298
           +  VF Y ++ +++ + + F    +FFY
Sbjct: 327 VSDVFRYGLLIYDFFKDSSFRIQHHFFY 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,844
Number of Sequences: 438
Number of extensions: 3095
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)