Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_H24
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 115 3e-26
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 115 3e-26
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 115 3e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 115 4e-26
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 115 4e-26
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 80 1e-15
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 80 1e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 59 4e-09
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 59 4e-09
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 59 4e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 59 4e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 59 4e-09
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 59 4e-09
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 59 4e-09
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 58 8e-09
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 58 8e-09
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 58 8e-09
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 58 8e-09
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 58 8e-09
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 54 1e-07
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 115 bits (277), Expect = 3e-26
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 115 bits (277), Expect = 3e-26
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 115 bits (277), Expect = 3e-26
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 115 bits (277), Expect = 3e-26
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 115 bits (276), Expect = 4e-26
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDL+SEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 115 bits (276), Expect = 4e-26
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTE ESNMNDL+SEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+ E+ +NDL+SE+QQY
Sbjct: 369 STAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 80.2 bits (189), Expect = 1e-15
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQY 548
STAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+ E+ +NDL+SE+QQY
Sbjct: 369 STAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+E +M L +Y++
Sbjct: 381 TTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E +M L +Y++
Sbjct: 387 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 379 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTE ++ L +Y++
Sbjct: 16 TTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E +M L +Y++
Sbjct: 359 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 38/54 (70%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 376 TTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 386 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 380 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+E ++ L +Y++
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = -3
Query: 712 STAIQELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEXESNMNDLVSEYQQ 551
+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF E ++ L +Y +
Sbjct: 384 TTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,813,021
Number of Sequences: 27780
Number of extensions: 246536
Number of successful extensions: 523
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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