Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_H23
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical ... 226 1e-59
AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z71259-6|CAA95792.1| 328|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z83105-1|CAB05480.1| 335|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 31 1.1
AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine r... 31 1.1
Z72508-1|CAA96641.1| 342|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 29 4.5
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 29 4.5
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL021481-3|CAD90182.1| 459|Caenorhabditis elegans Hypothetical ... 28 6.0
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical ... 28 6.0
>AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical
protein H43I07.3 protein.
Length = 339
Score = 226 bits (553), Expect = 1e-59
Identities = 108/219 (49%), Positives = 143/219 (65%)
Frame = -1
Query: 739 IIVSDGSKDSTVXVAESYSIXYGSDXVKCLELIKNRGKGGAVRLGIQSSRGATILFADAD 560
I+V DGS D T + I ++ L++ NRGKGGAV++G+ S G ILFADAD
Sbjct: 122 IVVDDGSTDETADIV--VQIGARRQNLRVLKMKANRGKGGAVKMGVLHSSGKLILFADAD 179
Query: 559 GASKFEDLTKLEVALKDIVKCDPLKDVKTTSESLGIVIGSRAHLEKESLAKRNIFRNILM 380
GA+KF D LE + +PL + +++ SRAHLE ES+A R++ R ILM
Sbjct: 180 GATKFADFENLEKEMLRTAGGEPLDE-----SFPAVIVASRAHLEAESMAVRSVPRTILM 234
Query: 379 YGFHFLVWLFTVKGIKDTQCGFKLFTRKAARICFESLHVNRWAFDVELLYIAQKLNIPIS 200
GFH LV+ F + IKDTQCGFKLFTR A F LH+ RWAFDVEL+++ ++ +P+
Sbjct: 235 LGFHLLVYTFAARTIKDTQCGFKLFTRSIAARIFPVLHIERWAFDVELIFLCERWTVPVK 294
Query: 199 EIPVRWTEIEGSKVTPVVAWIQMGCDLGLIWLKYRIGAW 83
E+ VRWTEIEGSK+TP+ +W+QMG DL LIW +Y IG W
Sbjct: 295 EVSVRWTEIEGSKITPIWSWLQMGRDLVLIWFRYTIGIW 333
>AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical
protein Y66H1A.2 protein.
Length = 239
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = -1
Query: 739 IIVSDGSKDSTVXVAESYSIXYGSDXVKCLELIKNRGKGGAVRLGIQSSRGATILFADAD 560
IIV D S D T +A+ YG D + + G G A G+ +RG I+ DAD
Sbjct: 39 IIVDDASPDGTQGIAKLLQKEYGDDKILIKPRVGKLGLGTAYSHGLSFARGEFIILMDAD 98
Query: 559 GASKFEDLTKLEVALKDIVKCDPLKDVKTTSESLGIVIGSRAHLEKESLAKRNIFRNILM 380
+ + + ++ +AL+ K D IV G+R + + ++ ++ R +
Sbjct: 99 LSHHPKFIPEM-IALQHKYKLD-------------IVTGTR-YKDGGGVSGWDLKRKTIS 143
Query: 379 YGFHFLVWLFTVKGIKDTQCGFKLFTRK-AARICFESLHVNRWAFDVELLYIAQKLNIPI 203
G +FL G+ D F+L+ R +++ ES+ + F +E+++ A+K I
Sbjct: 144 KGANFLAQFLLNPGVSDLTGSFRLYKRDILSKLIAESVS-KGYVFQMEMMFRAKKSGYRI 202
Query: 202 SEIPVRWTE 176
E+P+ + +
Sbjct: 203 GEVPISFVD 211
>Z71259-6|CAA95792.1| 328|Caenorhabditis elegans Hypothetical
protein F13G3.6 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = -1
Query: 736 IVSDGSKDSTVXVAESYSIXYGSDXVKCL--ELIKNRGKGGAVRLGIQSSRGATILFADA 563
+ DGS D TV + E+ + + + + + + G G A ++SS+G + F DA
Sbjct: 43 LADDGSVDDTVRILENARLEFEEMGMNVVVTHVPQPGGVGAAKDCAVRSSKGRYLCFNDA 102
Query: 562 DGASKFEDL-TKLEVALK 512
D S + ++LE+A K
Sbjct: 103 DDVSSPNRIKSQLELATK 120
>Z83105-1|CAB05480.1| 335|Caenorhabditis elegans Hypothetical
protein F14H3.1 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 237 NSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTV 350
N + T KL++H+ A +V++L P C+ F P V
Sbjct: 226 NDNPGVSVITQKLNRHLFKALVVQTLIPICICFFPCMV 263
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 186 LTGISDIGMFNFCAIYNNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTVNNQT 362
LTG D + + +Y+ STSN++L +L +LA L+ +F+ F + +T
Sbjct: 1092 LTGTVDAEISSGVFLYSKSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERT 1150
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 186 LTGISDIGMFNFCAIYNNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTVNNQT 362
LTG D + + +Y+ STSN++L +L +LA L+ +F+ F + +T
Sbjct: 1079 LTGTVDAEISSGVFLYSKSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERT 1137
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 186 LTGISDIGMFNFCAIYNNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTVNNQT 362
LTG D + + +Y+ STSN++L +L +LA L+ +F+ F + +T
Sbjct: 1077 LTGTVDAEISSGVFLYSKSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERT 1135
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 186 LTGISDIGMFNFCAIYNNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTVNNQT 362
LTG D + + +Y+ STSN++L +L +LA L+ +F+ F + +T
Sbjct: 1092 LTGTVDAEISSGVFLYSKSTSNSNLLPSQLIDVLLAPMLILIFAMVTSTFVMFLIEERT 1150
>AC006677-10|AAF39946.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein18 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 234 NNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIPFTV 350
N ++ L T ++ K + A ++++ P CVSF+P T+
Sbjct: 224 NQGSATMSLKTAQMQKRLFWALTIQTIIPICVSFMPVTL 262
>Z72508-1|CAA96641.1| 342|Caenorhabditis elegans Hypothetical
protein F28H7.1 protein.
Length = 342
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 213 FNFCAIYNNSTSNAHLFTCKLSKHILAAFLVKSLKPHCVSFIP 341
+ C ++ +S+ T KL ++ A V+++ P CVSF P
Sbjct: 220 YKICHKLSSQSSDMSEKTKKLQTQLMKALTVQAIIPTCVSFAP 262
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 394 RNILMYGFHFLVWLFTVKGIKDTQCGFKL 308
+NIL FH +WLF + + C F +
Sbjct: 30 KNILRMFFHIFMWLFYLSEVDSDNCSFNV 58
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 394 RNILMYGFHFLVWLFTVKGIKDTQCGFKL 308
+NIL FH +WLF + + C F +
Sbjct: 30 KNILRMFFHIFMWLFYLSEVDSDNCSFNV 58
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = -1
Query: 607 GIQSSRGATILFADADGASKFEDLTKLEVALKDIVKCDPLKDVKTTSESLGIVIGSRAHL 428
G+ + + DG K ED+ V K + K D K +K + L I + +
Sbjct: 347 GVNETMDTILAKVCEDGVEKHEDIDPKVVKAKKLAKIDYTKRLKLQVKKLDIQMRIKIPS 406
Query: 427 EKESLAKR 404
E L KR
Sbjct: 407 TPEELGKR 414
>AL021481-3|CAD90182.1| 459|Caenorhabditis elegans Hypothetical
protein Y43F4B.5b protein.
Length = 459
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 2/18 (11%)
Frame = -1
Query: 157 TPVVAW--IQMGCDLGLI 110
TPVV+W I++GCD GLI
Sbjct: 130 TPVVSWATIKLGCDAGLI 147
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 2/18 (11%)
Frame = -1
Query: 157 TPVVAW--IQMGCDLGLI 110
TPVV+W I++GCD GLI
Sbjct: 130 TPVVSWATIKLGCDAGLI 147
>AC024776-2|AAK68467.1| 400|Caenorhabditis elegans Hypothetical
protein Y41D4B.17 protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 504 TISFRATSNFVKSSNFEAPSASANNIVAPLELCMPSLTAPPFPLFFINSRH 656
+I+F+ ++ ++ SN+E +A+ + E+ PSL F NS H
Sbjct: 221 SIAFKVSNQWIDPSNYETTAATTTGFLMSQEVSTPSLKVD----FMFNSGH 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,686,434
Number of Sequences: 27780
Number of extensions: 366793
Number of successful extensions: 1042
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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