Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_H13
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 54 4e-08
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 40 7e-04
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 35 0.028
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 30 0.79
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 29 1.8
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 28 4.2
Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical pr... 27 5.6
U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical p... 27 5.6
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 5.6
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 5.6
AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical ... 27 5.6
Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical p... 27 7.4
Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical ... 27 7.4
Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical pr... 27 9.8
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 27 9.8
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = -2
Query: 295 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEE 128
FE F K++NR+YKD+++ + + +F K +++LN K+ T FGINKF+D + E
Sbjct: 43 FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102
Query: 127 QQSRLGLRLPAKKT 86
RL +P+ T
Sbjct: 103 FHGRLSNVVPSNNT 116
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 41.1 bits (92), Expect = 4e-04
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Frame = -2
Query: 394 FVSVALLIATVVMASSAETDTPR-HYDLNQAKELFEIFV---KEHNREYKDDADRELHYQ 227
F++ + + SS+E + + D + +++++ FV K+ +R YK +A+ +L Q
Sbjct: 7 FLNFQAFLGIFALESSSEPEFFEINIDRDHPEKVYQEFVEFKKKFSRTYKSEAENQLRLQ 66
Query: 226 SFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRLGLRLPAKKT 86
+F K + +LN+ + F +N+F+D T E RL R P T
Sbjct: 67 NFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRLS-RFPPNLT 116
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Frame = -2
Query: 295 FEIFVKEHNREYKDDADRELHYQSF---KKHLAEINQLNEKNPY-TTFGINKFADYTPEE 128
FE F+ ++ R YKD+ +++ +Q F + ++N+ +K + T +GINKF+D + +E
Sbjct: 47 FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -2
Query: 304 KELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQ 125
+++F F+ + +R+Y + E YQ F +++ E E+N +N+F D+T EE
Sbjct: 79 EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEEL 138
Query: 124 Q 122
Q
Sbjct: 139 Q 139
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -2
Query: 274 HNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 116
H + Y+ A+++ F K+ +I +LN K TFG NKFAD +E +R
Sbjct: 3 HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 30.3 bits (65), Expect = 0.79
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -2
Query: 403 KMNFVSVALLIATVVMASSAETDTPRHYD--LNQAKELFEIFVKEHNREYKDDADRELHY 230
K+N + LI+T+ S+ T P H+D +++ EI V+E E A +
Sbjct: 106 KLNDIRRRSLISTMDATSTPTTSVPIHFDSPRRESRPCLEIHVEESPEELSTHA---VEI 162
Query: 229 QSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLRLPA 95
F + L+E N L + + D E+ +S+ + PA
Sbjct: 163 TEFHRDLSE-NSLGTSTDHEDPSLTFRVDKELEQSESKKTTKRPA 206
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = -2
Query: 322 YDLNQAKELFEIFVKEHNRE------YK-DDAD--RELHYQSFKKHLAEINQLNEKNPYT 170
Y K E F + H E YK DDA RE H ++ +K L N+L E+ +
Sbjct: 110 YKTEHRKHQLERFFRAHKDEEWFRLKYKPDDAKKLREAHLENVQKRLQVFNELKEQGQFN 169
Query: 169 TFGINKFAD 143
F ++ F D
Sbjct: 170 KFSLD-FGD 177
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.9 bits (59), Expect = 4.2
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 361 VMASSAETDTPRHYDLNQAKELFEIF-VKEHNREYKDDADRELHYQSFKKHLAEINQLNE 185
++ S DTP Y L ++L +F K + +D+ R L LA +++L E
Sbjct: 281 LIRSRVPLDTP--YALRFVQQLGRVFNSKGDSSPALNDSLRPLKNSLLTHSLARLHKLVE 338
Query: 184 KNPYTTFGINKFAD 143
+N ++T N F D
Sbjct: 339 ENDFSTAHANAFVD 352
>Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical
protein F33A8.7 protein.
Length = 168
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -2
Query: 397 NFVSVAL-LIATVVMASSAE-TDTPRHYDLNQ 308
N+V V L L+ATVV+++ A+ TD DLNQ
Sbjct: 7 NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38
>U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical
protein EEED8.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 274 HNREYKDDADRELHYQSFKKHLAEINQLNEKN 179
H R +K A E+HY +F L E+ + EKN
Sbjct: 199 HERSWKPRAREEIHYFNFPNSLGELYSV-EKN 229
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 262 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 122
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 278 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 324
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 262 YKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 122
+ DDA ++ L+ +++ E TTFG+ K PE+++
Sbjct: 5124 FSDDATYVASDILEERSLSTVHEFGESEASTTFGVGKLVTKKPEKEE 5170
>AF016423-8|AAB65319.1| 409|Caenorhabditis elegans Hypothetical
protein F40A3.7 protein.
Length = 409
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
Frame = +3
Query: 153 LLMPNVV--YGFFSFNWF 200
LL PN++ Y FF+FNW+
Sbjct: 75 LLFPNILANYSFFTFNWY 92
>Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -2
Query: 289 IFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 116
I +KEH + + EL++ + K N N P+ FG + +Y E+ R
Sbjct: 537 IMLKEHFLVNEKPSTFELNFNRYAKTSEISNDTNNVEPHEVFGETEHVEYKNGEELYR 594
>Z69637-3|CAA93468.1| 173|Caenorhabditis elegans Hypothetical
protein F35G2.3 protein.
Length = 173
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 391 VSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYK 257
V+VALL+ +V E HY L E E +KEH +E K
Sbjct: 14 VTVALLMLQIV-----EEKAKAHYQLKLMCESSEEMIKEHQKEMK 53
>AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -2
Query: 289 IFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSR 116
I +KEH + + EL++ + K N N P+ FG + +Y E+ R
Sbjct: 537 IMLKEHFLVNEKPSTFELNFNRYAKTSEISNDTNNVEPHEVFGETEHVEYKNGEELYR 594
>Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical
protein T19B10.6 protein.
Length = 368
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 289 IFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKN 179
+FVKE NR DR+ H F+ H+ INQ N
Sbjct: 96 LFVKERNR------DRDGHGPQFQAHMHRINQAGGTN 126
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/94 (18%), Positives = 42/94 (44%)
Frame = -2
Query: 424 PLLIHCAKMNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDAD 245
P+L + +F+++ + I TV + + ++ + + L E +HN+ D
Sbjct: 35 PVLFFNMQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLE----KHNKCSPPDGR 90
Query: 244 RELHYQSFKKHLAEINQLNEKNPYTTFGINKFAD 143
++ + H+ IN+LN+ + + ++ D
Sbjct: 91 VDISHNIELVHIIGINELNQNMQVLVYIVQQWTD 124
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 298 LFEI--FVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQ 125
LF++ F++ +R D R QSF + + E + +++KN Y F + A T +
Sbjct: 640 LFDLDGFLRSRDRSSADFYKRFSETQSFMRFIEERSFVSDKNTYNAFFDDCIAKLTSAVE 699
Query: 124 QSR 116
R
Sbjct: 700 DGR 702
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,271,147
Number of Sequences: 27780
Number of extensions: 195228
Number of successful extensions: 669
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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