Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_H05
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p pro...    30   2.1  
AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA...    30   2.1  
AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA ...    30   2.1  

>AY069119-1|AAL39264.1|  614|Drosophila melanogaster GH13094p
           protein.
          Length = 614

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = -3

Query: 560 AGRSMQSIILT*YNINNSSRTTSKCQANESETSNVAFAARR*NLGHKFSISSESRLMNLY 381
           AGRS +S       +NN+ +  S  Q N S T +  FA R   L  K S+ S+S  + L 
Sbjct: 403 AGRSTRSNSFDVSLLNNAKQLVSDVQDNGSATLSGWFAKRHTPLARKKSVRSKSSAVAL- 461

Query: 380 SPQVAKKL 357
           S  V ++L
Sbjct: 462 SKDVLERL 469


>AE014298-2700|AAF48825.2|  614|Drosophila melanogaster CG6123-PA
           protein.
          Length = 614

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = -3

Query: 560 AGRSMQSIILT*YNINNSSRTTSKCQANESETSNVAFAARR*NLGHKFSISSESRLMNLY 381
           AGRS +S       +NN+ +  S  Q N S T +  FA R   L  K S+ S+S  + L 
Sbjct: 403 AGRSTRSNSFDVSLLNNAKQLVSDVQDNGSATLSGWFAKRHTPLARKKSVRSKSSAVAL- 461

Query: 380 SPQVAKKL 357
           S  V ++L
Sbjct: 462 SKDVLERL 469


>AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA
           protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = -3

Query: 233 VLLRR*ASIVRNSLYRFISRTAFNASLFFFCFVKEKVQYSALHSKTPYTLLYPVNILLLN 54
           +LL    ++  +S + +     +  S FFFC     V Y+ L+   P +LL   + L L 
Sbjct: 63  LLLLGTTALYSSSTFVYWGSPFYYRSNFFFC--SPVVSYNTLYRLPPSSLLKSSSALRLQ 120

Query: 53  CCAATECCCFER 18
            CA+  C C  +
Sbjct: 121 HCASLICECLAK 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,342,433
Number of Sequences: 53049
Number of extensions: 458416
Number of successful extensions: 1057
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)