Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_H03
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p pro...   174   1e-43
AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB...   174   1e-43
AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA...   174   1e-43
AY051717-1|AAK93141.1|  638|Drosophila melanogaster LD24903p pro...    31   1.1  
AE014296-3624|AAF51786.1|  638|Drosophila melanogaster CG7414-PA...    31   1.1  
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P...    29   7.8  

>AY122066-1|AAM52578.1|  690|Drosophila melanogaster AT09438p
           protein.
          Length = 690

 Score =  174 bits (423), Expect = 1e-43
 Identities = 80/152 (52%), Positives = 106/152 (69%)
 Frame = -3

Query: 682 DFTIMXVADHYQMSGIEWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVMKEGFAQ 503
           D+ I    DH++ S +EWDPTGRYVVTGVSS K K D G+ +++FQG+I++R + + F Q
Sbjct: 523 DYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQ 582

Query: 502 FHWRPRPPTLLSXXXXXXXXXXXXKYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 323
           F WRPRPPTLLS            KYY+ FE KDR+R ++ASKEL+ KR++  + F EYR
Sbjct: 583 FLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEYR 642

Query: 322 ESKIQEWNEQKPRRLELRDYVDTDGLDTDAVN 227
             +I EW EQK RR+ LR +VDTD L+TD V+
Sbjct: 643 NKRIAEWAEQKSRRIMLRGHVDTDNLETDEVD 674


>AE013599-2499|AAG22261.1|  690|Drosophila melanogaster CG4878-PB,
           isoform B protein.
          Length = 690

 Score =  174 bits (423), Expect = 1e-43
 Identities = 80/152 (52%), Positives = 106/152 (69%)
 Frame = -3

Query: 682 DFTIMXVADHYQMSGIEWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVMKEGFAQ 503
           D+ I    DH++ S +EWDPTGRYVVTGVSS K K D G+ +++FQG+I++R + + F Q
Sbjct: 523 DYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQ 582

Query: 502 FHWRPRPPTLLSXXXXXXXXXXXXKYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 323
           F WRPRPPTLLS            KYY+ FE KDR+R ++ASKEL+ KR++  + F EYR
Sbjct: 583 FLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEYR 642

Query: 322 ESKIQEWNEQKPRRLELRDYVDTDGLDTDAVN 227
             +I EW EQK RR+ LR +VDTD L+TD V+
Sbjct: 643 NKRIAEWAEQKSRRIMLRGHVDTDNLETDEVD 674


>AE013599-2498|AAF57842.1|  690|Drosophila melanogaster CG4878-PA,
           isoform A protein.
          Length = 690

 Score =  174 bits (423), Expect = 1e-43
 Identities = 80/152 (52%), Positives = 106/152 (69%)
 Frame = -3

Query: 682 DFTIMXVADHYQMSGIEWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVMKEGFAQ 503
           D+ I    DH++ S +EWDPTGRYVVTGVSS K K D G+ +++FQG+I++R + + F Q
Sbjct: 523 DYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQ 582

Query: 502 FHWRPRPPTLLSXXXXXXXXXXXXKYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYR 323
           F WRPRPPTLLS            KYY+ FE KDR+R ++ASKEL+ KR++  + F EYR
Sbjct: 583 FLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEYR 642

Query: 322 ESKIQEWNEQKPRRLELRDYVDTDGLDTDAVN 227
             +I EW EQK RR+ LR +VDTD L+TD V+
Sbjct: 643 NKRIAEWAEQKSRRIMLRGHVDTDNLETDEVD 674


>AY051717-1|AAK93141.1|  638|Drosophila melanogaster LD24903p
           protein.
          Length = 638

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 634 EWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVM 521
           EW P G + VT  ++ + ++  G+ ++ + G +L   M
Sbjct: 380 EWHPNGEWFVTATTAPRLRISNGFKVYHYSGALLHETM 417


>AE014296-3624|AAF51786.1|  638|Drosophila melanogaster CG7414-PA
           protein.
          Length = 638

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 634 EWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKILRRVM 521
           EW P G + VT  ++ + ++  G+ ++ + G +L   M
Sbjct: 380 EWHPNGEWFVTATTAPRLRISNGFKVYHYSGALLHETM 417


>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
            protein.
          Length = 1833

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -3

Query: 406  KDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQK 290
            + R+ SSK   ELV++R+    K +E  +SK+ E+ E++
Sbjct: 1339 ESRLESSKIKTELVSERSANEIKISE-MQSKLNEFEEER 1376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,833,834
Number of Sequences: 53049
Number of extensions: 482378
Number of successful extensions: 1278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)