Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_H03
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   2.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   4.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.3  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 188 FFFHEKFNNLFDCIHRIRVKTVCVYVISK 274
           F+  +  NNL +   R ++ T C++V S+
Sbjct: 48  FYRQDTKNNLLNAYVRFKLVTDCIFVTSE 76


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 620 CWIPFDTRHLIMI 658
           CW PF T+ L+ +
Sbjct: 282 CWAPFHTQRLLYV 294


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 620 CWIPFDTRHLI 652
           CW+PF T +L+
Sbjct: 21  CWLPFFTMYLV 31


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 620 CWIPFDTRHLI 652
           CW+PF T +L+
Sbjct: 469 CWLPFFTMYLV 479


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 563 LHLVFPGQDTQESDE 519
           +H V PG+ T  SDE
Sbjct: 132 IHRVLPGKPTTTSDE 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,654
Number of Sequences: 438
Number of extensions: 3054
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)