Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_G19
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 44  WTSAMPRAEPSRCLPQDKY 100
           WTS + + E    LP DKY
Sbjct: 423 WTSTLTQKEYLENLPSDKY 441


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 519 FLHPVFLFKIKYVFRKQFKFSLISF-YRSFFLQLARKIFLYVSMRRI 656
           F + ++LF + Y++    + S+I+F Y      +     +Y ++ RI
Sbjct: 147 FCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNLLRI 193


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 386 LRLMKYNKIGTLKE**TLLKEFSRGDLLRVPCMASH 279
           +R MKY+  GTLK    L   F+  ++L V     H
Sbjct: 84  VRFMKYHFFGTLKLWSQLFSTFAGIEVLHVVKQCYH 119


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 51  QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRF 146
           + CQ  ++++ Y+  + Q  F Y+YN+ Y  +
Sbjct: 194 ETCQYDTESS-YQFNDPQFNFNYQYNQAYSNY 224


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 51  QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRF 146
           + CQ  ++++ Y+  + Q  F Y+YN+ Y  +
Sbjct: 214 ETCQYDTESS-YQFNDPQFNFNYQYNQAYSNY 244


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 309 PSTSALHG*PSESLITQRLLINPE*ECRCN 220
           PST +  G P  + +T   L+  +  C C+
Sbjct: 684 PSTGSKPGKPRSAFLTDLKLMGGKWSCDCD 713


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,071
Number of Sequences: 336
Number of extensions: 3215
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)