Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_G19
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p...    29   5.8  
M23543-1|AAA72722.1|  530|Drosophila melanogaster protein ( Dros...    29   5.8  
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein...    29   5.8  
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC...    29   5.8  
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA...    29   5.8  
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB...    29   5.8  

>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
            protein.
          Length = 1480

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51   QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
            Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 914  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 947


>M23543-1|AAA72722.1|  530|Drosophila melanogaster protein (
           Drosophila melanogasterslit locus encoding a protein
           associated with neural developmentwith 52D EGF
           homologous domains gene, exons 1 and 2 (partial). ).
          Length = 530

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51  QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
           Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 34  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 67


>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
            protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51   QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
            Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 938  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 971


>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
            isoform C protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51   QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
            Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 938  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 971


>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
            isoform A protein.
          Length = 1480

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51   QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
            Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 914  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 947


>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
            isoform B protein.
          Length = 1469

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 51   QQCQGQSQAAAYRKINTQCLFQYEYNEKYLRFTV 152
            Q CQ Q+Q  A  +   QCL Q  Y+ K+  F +
Sbjct: 914  QPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMI 947


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,410,625
Number of Sequences: 53049
Number of extensions: 507863
Number of successful extensions: 867
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)