Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_G17
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 30 1.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 2.4
Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68336-7|CAL69738.1| 236|Caenorhabditis elegans Hypothetical pr... 29 3.2
U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical pr... 29 4.2
U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical pr... 29 4.2
U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 29 4.2
U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical pr... 29 5.6
U64836-1|AAX22289.1| 321|Caenorhabditis elegans Serpentine rece... 29 5.6
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 28 7.4
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 28 7.4
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 28 7.4
Z82272-5|CAB05220.1| 341|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 28 9.7
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 479 IIEALILPRCISDKNSLSVPDLVLPHSTNPSTSKSPTVHSPYTQSSK 619
+IE +I CIS ++ + HS +P+T+ P + S Y + K
Sbjct: 299 VIEPIIAMTCISAFRRATINAVTCSHSVSPTTAVLPVLVSKYRNTEK 345
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.4
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Frame = +2
Query: 41 SLITIRPSGSTLSGECFST*ARKTCWSRPTTTSFFLWSLIIVNPSPPS-----HRNDVVI 205
S T PS ST + E ST + T TT + S PS + + V
Sbjct: 401 STTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTS 460
Query: 206 TLYIFSTSNGVWFFPTTTEVTLLPSGSVILYVTRSPETCKSHGPLKGLYPQASLTPLSRA 385
T+ S+S+ PT+TE T S + T +P T + GP +S TP S A
Sbjct: 461 TVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPST-STTGP-----SSSSSTPSSTA 514
Query: 386 SN 391
S+
Sbjct: 515 SS 516
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.4
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Frame = +2
Query: 41 SLITIRPSGSTLSGECFST*ARKTCWSRPTTTSFFLWSLIIVNPSPPS-----HRNDVVI 205
S T PS ST + E ST + T TT + S PS + + V
Sbjct: 401 STTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTS 460
Query: 206 TLYIFSTSNGVWFFPTTTEVTLLPSGSVILYVTRSPETCKSHGPLKGLYPQASLTPLSRA 385
T+ S+S+ PT+TE T S + T +P T + GP +S TP S A
Sbjct: 461 TVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPST-STTGP-----SSSSSTPSSTA 514
Query: 386 SN 391
S+
Sbjct: 515 SS 516
>Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical
protein F57G4.8 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 442 QLEDSPLGYIAFHYRSPYIATLHKRQELFVGTRFSFAPLHKSID*QISNSAFTVH 606
+L D L I H + + T+ K F AP K ID +ISNS FT++
Sbjct: 84 ELPDDMLNEIFDHVKPIELFTIRKVSRRFRDVIGGRAPGFKQIDVEISNSNFTIN 138
>Z68336-7|CAL69738.1| 236|Caenorhabditis elegans Hypothetical
protein F22B3.10 protein.
Length = 236
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 191 NDVVITLYIFSTSNGVWFFPTTTEVTLLPSGS 286
N+ T Y+F T N VW FPTT T+ +GS
Sbjct: 89 NNQNATGYLFVTDNTVW-FPTTVNYTISLAGS 119
>U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical
protein T17E9.2c protein.
Length = 403
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 330 WLLQVSGLRVTYN--ITLPEGNRVTSVVVGKNQTPLDVEKMYNVITTSFLC 184
W LQV G R ++ + NR+ + + QT +K N++ +FLC
Sbjct: 105 WALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTVNMVEINFLC 155
>U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical
protein T17E9.2b protein.
Length = 452
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 330 WLLQVSGLRVTYN--ITLPEGNRVTSVVVGKNQTPLDVEKMYNVITTSFLC 184
W LQV G R ++ + NR+ + + QT +K N++ +FLC
Sbjct: 154 WALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTVNMVEINFLC 204
>U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical
protein T17E9.2a protein.
Length = 450
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 330 WLLQVSGLRVTYN--ITLPEGNRVTSVVVGKNQTPLDVEKMYNVITTSFLC 184
W LQV G R ++ + NR+ + + QT +K N++ +FLC
Sbjct: 152 WALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTVNMVEINFLC 202
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 29.1 bits (62), Expect = 4.2
Identities = 31/117 (26%), Positives = 54/117 (46%)
Frame = +2
Query: 359 ASLTPLSRASNMYFPCNSKVFILSLKGNNSKTAPWVISPFIIEALILPRCISDKNSLSVP 538
A LTPL + P FILS P+++SPFI+ +++ + +LS P
Sbjct: 712 AILTPLCMVPIILSPGVGLPFILS---------PFILSPFILSPVVMAPLVLSPFALS-P 761
Query: 539 DLVLPHSTNPSTSKSPTVHSPYTQSSK*YVLLLLPIGTFSASCTILAYGSSLAFIFS 709
+ +P++ P SP V SP S +V + + ++ S +L+ G+ + S
Sbjct: 762 FIGIPNALTP-LILSPFVLSPLVLSPP-FVSAFV-LNPYALSPAVLSNGAVFTAVLS 815
>U64857-4|AAN84850.1| 356|Caenorhabditis elegans Hypothetical
protein C37C3.7 protein.
Length = 356
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 296 YVTRSPETCKSHGPLKGLYPQASLTP 373
Y R E CK HGPL +P L P
Sbjct: 199 YTGRRCEQCKKHGPLIEPFPHCELDP 224
>U64836-1|AAX22289.1| 321|Caenorhabditis elegans Serpentine
receptor, class x protein92, isoform b protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 404 CNSKVFILSLKGNNSKTAPWVISPFIIEALILPRCISDKNSLSVPDLVLPHSTNPSTSKS 583
CNS + + LK + KTA I F + I+ I+ + +P +L +S P +S
Sbjct: 29 CNSSIVCIFLKEKSEKTAFNTICFFRATSNIIILTIAFLTNF-LPKTLLGYSPYPDVIES 87
Query: 584 PTVHSPYT-QSSK*YVLLLLPIGTFSA 661
+H +T Y ++L+ I F A
Sbjct: 88 WLIHISHTLYLGNEYQIVLIAINRFCA 114
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/139 (19%), Positives = 57/139 (41%)
Frame = +2
Query: 119 SRPTTTSFFLWSLIIVNPSPPSHRNDVVITLYIFSTSNGVWFFPTTTEVTLLPSGSVILY 298
SR + T+ +L + P PS+ + S T+T +L P ++
Sbjct: 552 SRRSETTRYLSPTTPIKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFSLQPQFGLVRV 611
Query: 299 VTRSPETCKSHGPLKGLYPQASLTPLSRASNMYFPCNSKVFILSLKGNNSKTAPWVISPF 478
SP + +H P +A L+P + ++ + +S+ L G+ A +S
Sbjct: 612 PPDSPHSIMAHRPPPTTSSRAPLSPHNYSTTQGYSTSSR----GLYGDKKPLARGSVSTS 667
Query: 479 IIEALILPRCISDKNSLSV 535
+ ++ + R +S+ ++ V
Sbjct: 668 TLPSMYMTRKMSENGAVEV 686
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/139 (19%), Positives = 57/139 (41%)
Frame = +2
Query: 119 SRPTTTSFFLWSLIIVNPSPPSHRNDVVITLYIFSTSNGVWFFPTTTEVTLLPSGSVILY 298
SR + T+ +L + P PS+ + S T+T +L P ++
Sbjct: 552 SRRSETTRYLSPTTPIKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFSLQPQFGLVRV 611
Query: 299 VTRSPETCKSHGPLKGLYPQASLTPLSRASNMYFPCNSKVFILSLKGNNSKTAPWVISPF 478
SP + +H P +A L+P + ++ + +S+ L G+ A +S
Sbjct: 612 PPDSPHSIMAHRPPPTTSSRAPLSPHNYSTTQGYSTSSR----GLYGDKKPLARGSVSTS 667
Query: 479 IIEALILPRCISDKNSLSV 535
+ ++ + R +S+ ++ V
Sbjct: 668 TLPSMYMTRKMSENGAVEV 686
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 28.3 bits (60), Expect = 7.4
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 455 APWVISPFIIEALILPRCISDKNSLS----VPDLVLPHSTNPSTSKSPTVHSPYTQSSK* 622
+P+V++PFI+ + L I +LS VP+L+ P +P SP + SP S+
Sbjct: 644 SPFVLTPFILSPVALTPIILSPFALSPFIGVPNLMTPIILSPFV-LSPLILSPPFVSA-- 700
Query: 623 YVLLLLPIGTFSASCTILAYGSSLAFIFSSS 715
+L P ++ S T+L+ G+ + S S
Sbjct: 701 --FVLTP---YALSPTVLSSGAVFTAVLSPS 726
>Z82272-5|CAB05220.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.8 protein.
Length = 341
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 309 LRVTYNITLPEGNRVTSVVVGKNQTPLDVEKMYNVITTSFLCDGG-DGFTMIKDHKKNEV 133
L TYN+T+ G R++S+V + T V+ +T + DG FT K + K ++
Sbjct: 254 LNSTYNVTVNGGTRMSSLVAVSDITMHMVDVQMKDESTVTVYDGSPSAFTFDKTYTKTQL 313
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 524 SLSVPDLVLPHSTNPSTSKSPTVHSPY 604
S+S+ L+ PHS+NPS+S + S Y
Sbjct: 6 SISLLFLIFPHSSNPSSSNFLDIASTY 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,215,076
Number of Sequences: 27780
Number of extensions: 497905
Number of successful extensions: 1355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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