Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_G15
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38016-1|CAA86114.1|  856|Caenorhabditis elegans serine/threonin...    30   1.5  
AL117207-1|CAB60406.1|  856|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC006713-3|AAK68405.1|  291|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF068716-7|AAC17746.1|  384|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z38016-1|CAA86114.1|  856|Caenorhabditis elegans serine/threonine
           kinase protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +3

Query: 330 RLLTPQITMPIYAAEDKTQLTQDNPGESYLERPRPSALRIIDARKRKMAGVVIQKKMTFL 509
           R++TPQ ++P+      T+L    P     E PR     I       + G  +Q+   F 
Sbjct: 300 RIITPQSSLPVPKRAGSTKLDSPTPVRRIGESPRVQRRVITPGMPSPVPGAPMQESTDFT 359

Query: 510 FI 515
           F+
Sbjct: 360 FL 361


>AL117207-1|CAB60406.1|  856|Caenorhabditis elegans Hypothetical
           protein Y60A3A.1 protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +3

Query: 330 RLLTPQITMPIYAAEDKTQLTQDNPGESYLERPRPSALRIIDARKRKMAGVVIQKKMTFL 509
           R++TPQ ++P+      T+L    P     E PR     I       + G  +Q+   F 
Sbjct: 300 RIITPQSSLPVPKRAGSTKLDSPTPVRRIGESPRVQRRVITPGMPSPVPGAPMQESTDFT 359

Query: 510 FI 515
           F+
Sbjct: 360 FL 361


>AC006713-3|AAK68405.1|  291|Caenorhabditis elegans Hypothetical
           protein Y119D3A.2 protein.
          Length = 291

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 20  KKVKIIHLRTEMLFLXNRLHFNFSFHKYLVNKKLKPIINIRNY*DRLCKKK 172
           K  KI+HL+ E + L     + F F ++ VN     I N   + D L ++K
Sbjct: 183 KNTKILHLKNEAMKLCPPFKYLFQFTEFDVNAFYFSIQNAVQFRDDLLRRK 233


>Z74041-9|CAA98523.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +2

Query: 188 VLKHRAFNVCDGN--RVECSVSF*QGKNCSRINCMRLNRNPLRWSNQTCSTLNTSNHD 355
           VL  RAF    G   ++EC V + +   C + NC   NR    +     +TL T N D
Sbjct: 685 VLPFRAFRFKQGEAVKIECEVKYCE--KCKKANCPSRNRRFTTFDESEDTTL-TGNED 739


>Z74035-5|CAA98485.2|  801|Caenorhabditis elegans Hypothetical
           protein F47G9.3 protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +2

Query: 188 VLKHRAFNVCDGN--RVECSVSF*QGKNCSRINCMRLNRNPLRWSNQTCSTLNTSNHD 355
           VL  RAF    G   ++EC V + +   C + NC   NR    +     +TL T N D
Sbjct: 685 VLPFRAFRFKQGEAVKIECEVKYCE--KCKKANCPSRNRRFTTFDESEDTTL-TGNED 739


>U80454-5|AAB37877.1|  368|Caenorhabditis elegans Hypothetical
           protein T16A1.8 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 401 SRRKLFRETTTFGFKDYRRKEEEDGWRR-DPKKND 502
           + R  F E + F    Y  KEE+D W+R + K+ND
Sbjct: 247 TERLRFVEVSLFEGIGYMEKEEDDHWKRFEIKRND 281


>AF068716-7|AAC17746.1|  384|Caenorhabditis elegans Hypothetical
           protein F26D11.2 protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 410 KLFRETTTFGFKDYRRKEEEDGWRR--DPKKNDFSVYYEIKMPEYNXVFLK 556
           K+F+    +G K +R +  +   R   DP+K  FS    + +P YN   LK
Sbjct: 317 KMFQLLEEYGIKSFRVETADYTVRAFADPEKTRFSSINLLDVPMYNDAILK 367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,042,070
Number of Sequences: 27780
Number of extensions: 256942
Number of successful extensions: 633
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)