Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_G13
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 37 0.017
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 37 0.017
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 37 0.017
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 37 0.017
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 36 0.029
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 36 0.051
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 35 0.067
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 34 0.12
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.20
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 33 0.36
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 32 0.47
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 0.83
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 0.83
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 0.83
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 0.83
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.9
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 3.3
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 29 3.3
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 3.3
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.8
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 29 5.8
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 5.8
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 29 5.8
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 7.7
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 28 7.7
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 37.1 bits (82), Expect = 0.017
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 626
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 50 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 108
Query: 625 PNMVKKIDLAPTVES----DAAAVPEIKTPEAADAPKLADNPVDED 500
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 109 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 730 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 551
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 550 PEAADAPKLADNP 512
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 37.1 bits (82), Expect = 0.017
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 626
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 625 PNMVKKIDLAPTVES----DAAAVPEIKTPEAADAPKLADNPVDED 500
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 730 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 551
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 550 PEAADAPKLADNP 512
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 37.1 bits (82), Expect = 0.017
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 626
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 625 PNMVKKIDLAPTVES----DAAAVPEIKTPEAADAPKLADNPVDED 500
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 730 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 551
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 550 PEAADAPKLADNP 512
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 37.1 bits (82), Expect = 0.017
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 626
A + P A SA + A+ P+ EVQ V + S SA +E S SA +
Sbjct: 87 AADAPAPGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEV 145
Query: 625 PNMVKKIDLAPTVES----DAAAVPEIKTPEAADAPKLADNPVDED 500
P + D +S DA+A + PEA +AP++A +DE+
Sbjct: 146 PGSTEAQDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 730 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKT 551
+D T V ++ ++E + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 550 PEAADAPKLADNP 512
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 36.3 bits (80), Expect = 0.029
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKV-----EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADS 638
KS E P E K ++ V +EPAA E+ K + V E KEE P++ +E D
Sbjct: 126 KSEEAPAPEEKKSEEVVAAEEKKEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDE 183
Query: 637 AAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP 530
+ K AP + ++ A E K E AP
Sbjct: 184 PVVNTEEKKDAAEAPAADEESEAAEE-KVAETTVAP 218
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 35.5 bits (78), Expect = 0.051
Identities = 28/102 (27%), Positives = 38/102 (37%)
Frame = -1
Query: 796 SEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 617
S +P+ A E PA P +T A AE + P+A + +A +A P
Sbjct: 546 SSVPEETPAPAPAADETPAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAP 605
Query: 616 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 491
D P + A A E P A A P E+ PA
Sbjct: 606 APAADETP---APAPAAEETPAPAPAVEETPAPAPAVEETPA 644
Score = 31.5 bits (68), Expect = 0.83
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = -1
Query: 787 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 620
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 619 MVKKIDLAPTVESDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 485
A + E+ A + +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = -1
Query: 787 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 608
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 607 IDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPA 491
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAA 632
A+++E A A +A+ E PA+ P +T A AE + P+A T A + +AA
Sbjct: 684 AQAAEETPAPAPAAE---ETPASAPAAEETPAPAPAAEEAPAPAPAAPETPAPAAEGAAA 740
Query: 631 IIPNMVKKIDLAPTVESDAAAVPEIKTPEAADA 533
P + D A + ++ A+ + +A+ A
Sbjct: 741 PAPIVSSGYDAAQSTDTVVASSAPATSSDASGA 773
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 35.1 bits (77), Expect = 0.067
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = -1
Query: 781 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 602
AE K D K E P +P+ + E + +KP +T + + +AA K+
Sbjct: 341 AEKKKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR-- 394
Query: 601 LAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
PT E A E+K+ AA P ++ P D+
Sbjct: 395 -PPTTEKPTATTEEVKSTTAAAKP--SERPTGHDE 426
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 34.3 bits (75), Expect = 0.12
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = -1
Query: 781 AEAKSADIKVEEPAAQPEDSKTEVQ----ATVAEISKEEKPSATDAEGSADSAAIIPNMV 614
A A+SA VEE AA E ++ V+ AT A S E+P A +A+S P
Sbjct: 610 APAESAPASVEE-AAPSESTQAPVEEHKDATTAADSSHEEPKAESDAPAAESVETAPVEE 668
Query: 613 KKIDLAPT-VES--DAAAVPEIKTPEAADAP 530
K + +PT +ES D + + E+A AP
Sbjct: 669 HKDEASPTALESVEDVIEAVHVASTESAPAP 699
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.20
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = -1
Query: 772 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 596
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 595 PTVESDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 488
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 757 KVEEPAAQP-EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVES 581
K+EE A + E+ K ++Q+ A D S D +IP VK I PT+
Sbjct: 435 KLEEHAVKKLEEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPL 494
Query: 580 DAAAVPEIKTPEA 542
+ V +++ P A
Sbjct: 495 ETQDV-DMREPSA 506
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = -1
Query: 799 SSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 620
S + P AKS D + ++ E+ + + + + SK K +A+D + + A +
Sbjct: 185 SKKSPKKSAKSKD----DDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVATKKS 240
Query: 619 MVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
K P E D +KTP+ K A+ P +ED+
Sbjct: 241 KKSKRAETPEEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.83
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 626
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 625 -PNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -1
Query: 877 SPRDSDIAKPEXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATV 698
SP S KP+ + P + KS + E+PA+ + KT ++
Sbjct: 1761 SPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAA 1820
Query: 697 AEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP 530
E+ KE+ PS+ + +S P ++ +PT + P+ K ++ +A
Sbjct: 1821 EELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAE 1880
Query: 529 K 527
K
Sbjct: 1881 K 1881
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 31.5 bits (68), Expect = 0.83
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 626
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 625 -PNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -1
Query: 877 SPRDSDIAKPEXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATV 698
SP S KP+ + P + KS + E+PA+ + KT ++
Sbjct: 1761 SPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAA 1820
Query: 697 AEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP 530
E+ KE+ PS+ + +S P ++ +PT + P+ K ++ +A
Sbjct: 1821 EELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAE 1880
Query: 529 K 527
K
Sbjct: 1881 K 1881
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 31.5 bits (68), Expect = 0.83
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 626
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 625 -PNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -1
Query: 877 SPRDSDIAKPEXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATV 698
SP S KP+ + P + KS + E+PA+ + KT ++
Sbjct: 1761 SPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAA 1820
Query: 697 AEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP 530
E+ KE+ PS+ + +S P ++ +PT + P+ K ++ +A
Sbjct: 1821 EELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAE 1880
Query: 529 K 527
K
Sbjct: 1881 K 1881
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 31.5 bits (68), Expect = 0.83
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII- 626
K S PD + KS + E+PA+ + + EV++ KE+ P++ + + +A +
Sbjct: 1374 KKSPSPDKKEKSPEKTEEKPASPTKKTGEEVKS-----PKEKSPASPTKKEKSPAAEEVK 1428
Query: 625 -PNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDK 497
P +K +PT + + + P KT + +P ++K
Sbjct: 1429 SPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEK 1472
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -1
Query: 877 SPRDSDIAKPEXXXXXXXXXXXXEAKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATV 698
SP S KP+ + P + KS + E+PA+ + KT ++
Sbjct: 1761 SPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAA 1820
Query: 697 AEIS----KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAP 530
E+ KE+ PS+ + +S P ++ +PT + P+ K ++ +A
Sbjct: 1821 EELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAE 1880
Query: 529 K 527
K
Sbjct: 1881 K 1881
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 626
AK P E+ + PA +P D + A A K + + G ADS
Sbjct: 549 AKKDPAPAKESLKPKADTKAPA-KPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKE 607
Query: 625 PNMVKKIDLAPTVESDAAAVPEIK-TPEAADAPKLADNPVD 506
P K D +P A VP+ + P A P+ P D
Sbjct: 608 PEKSKPRDPSPKKAVPAKPVPKTEVAPAAVKKPEPISKPKD 648
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 679 EKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDE 503
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 502 DKP 494
P
Sbjct: 340 TTP 342
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/85 (23%), Positives = 29/85 (34%)
Frame = -1
Query: 748 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAA 569
E +A PE + + S P S+A+ P APT + +
Sbjct: 197 ESSASPEMLRLAKHYKIGSSSTSAPPKTAAGAPKRLSSAVAPRRAPPASAAPTRRAPSPK 256
Query: 568 VPEIKTPEAADAPKLADNPVDEDKP 494
P + A +PK PV KP
Sbjct: 257 APVVAPTRRAPSPKAPVAPVAPVKP 281
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 754 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 608
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 613 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 485
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/103 (15%), Positives = 41/103 (39%)
Frame = -1
Query: 793 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 614
E P+ + + E A + EV+ +V ++ +++ + T + + IP+
Sbjct: 1232 EDPEEHPEQLPVSASEKANNQIVPEVEVEGSVVPVTNQQEENVTSEGPTLQEGSSIPSSS 1291
Query: 613 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 485
+ + +++ +TP A ++PK +P +
Sbjct: 1292 HIYTVDELLGTESPGPEATETPVAEESPKKKSGKTTRGRPKKV 1334
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 805 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 644
A+ E +A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 21 AEEVEEEEAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/103 (15%), Positives = 41/103 (39%)
Frame = -1
Query: 793 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 614
E P+ + + E A + EV+ +V ++ +++ + T + + IP+
Sbjct: 1232 EDPEEHPEQLPVSASEKANNQIVPEVEVEGSVVPVTNQQEENVTSEGPTLQEGSSIPSSS 1291
Query: 613 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 485
+ + +++ +TP A ++PK +P +
Sbjct: 1292 HIYTVDELLGTESPGPEATETPVAEESPKKKSGKTTRGRPKKV 1334
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 736 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 593
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 736 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 593
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -1
Query: 778 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 599
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 598 APTVESDAAAVPEIKTP 548
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -1
Query: 778 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 599
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 598 APTVESDAAAVPEIKTP 548
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -1
Query: 778 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 599
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 598 APTVESDAAAVPEIKTP 548
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -1
Query: 778 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 599
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 598 APTVESDAAAVPEIKTP 548
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -1
Query: 793 EIPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMV 614
E P A+ + +K+ + P+ KT VA+ KE+KP + +A A I +V
Sbjct: 314 EKPTAKTAAPPVKLLTSSPPPKIPKT-----VAQPPKEKKPVMESVKTAAPPAKEIKPIV 368
Query: 613 KKIDLAPTVESDAAAVP-EIKTPEAADA 533
KI T ++ AVP E+K +AA A
Sbjct: 369 AKI----TEKAAEPAVPKEVKPAKAATA 392
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Frame = -1
Query: 799 SSEIPDAEAKSADIKVE-EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 623
SSE + +S + + +PA + SKT T A K+ K S + + P
Sbjct: 205 SSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEP 264
Query: 622 NMVKKIDLAPTVE----SDAAAVPEIKTPEAADAPKLADNPVDEDK 497
+ + + T E S++ E T ++ + PK D +DK
Sbjct: 265 STEESSESPETSEEPQSSESTPTSEESTEQSTEKPKKEDKKDKKDK 310
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 685 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPTVESDAAAVPEIKTPEAADAPKLADNPV 509
+ E+ S +EG++ +I P KKI D+AP + D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAPAL-PDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 508 DEDKP 494
P
Sbjct: 247 TSQSP 251
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Frame = -1
Query: 802 KSSEIPDAEAKSADIKV--------EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGS 647
K SEIPD + +KV E+P + PE+S+ E ++K++K + S
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIEKPQSMPEESEDE---EFKLLTKKKKMGVIANDPS 2925
Query: 646 ADSAAIIPNMVKK 608
D + II KK
Sbjct: 2926 NDGSEIIKMSKKK 2938
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -1
Query: 763 DIKVEEPAAQP--EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPT 590
D+K A+P E +V T A S+EE + E + P+M KK+ +
Sbjct: 475 DVKAPTTTAKPVKETDNAKVLPTEASDSEEEADEYYEDEDD-EQVKKTPDMKKKVKVVDI 533
Query: 589 VESDAAAVPEIKTPEAADAPKLADNPVDED 500
+ E K P+ + D+ D++
Sbjct: 534 KPKEVTIEEEKKAPKLVETSVQTDDEDDDE 563
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,477,988
Number of Sequences: 27780
Number of extensions: 240860
Number of successful extensions: 935
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -