Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_G08
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical...    30   1.5  
AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm rece...    28   4.4  
Z73911-3|CAC42339.1|  324|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z66561-3|CAA91455.1|  422|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
           protein Y51H7C.11 protein.
          Length = 1058

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 47  VQGK*LSIWKIFLLCFPFITLSIMKFAITHAF 142
           +QG  LS+WK   +  P + LS+  F+ +H F
Sbjct: 744 IQGMRLSMWKKKFISEPLLQLSLQSFSTSHKF 775


>AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 16 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 522 INILKLQFTIPYFSIIVHSFITYFNDFFLLI*SVF 418
           I++L +QF   YF+I    ++ YF  ++ LI  V+
Sbjct: 104 ISLLAVQFLYRYFAIFHEYYLKYFKGWYFLIWIVY 138


>Z73911-3|CAC42339.1|  324|Caenorhabditis elegans Hypothetical
           protein T12A7.7 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 20  NSNKYFLNPVQGK*LSIWKIFLLCFPFITLSIMKFAITHAFEFIYCILICF*TVI 184
           N + Y    VQ +  S +K+     PF+TL I +  + H F  IY  ++    +I
Sbjct: 9   NESYYSSYKVQAELNSYYKLSCHFIPFLTLPIYRSLLLHLFGEIYWTVLLIPIII 63


>Z66561-3|CAA91455.1|  422|Caenorhabditis elegans Hypothetical
           protein F08G12.3 protein.
          Length = 422

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -1

Query: 217 RVYFYIYAYIANYCLETNK--NAVYEFKSMGDGKFHYT*SYKRKTKQKYFPNG 65
           +++  ++  +A +   TN+  + V E + + + ++ +   +K   K+KY PNG
Sbjct: 346 QIFEMVFPKLAVFLYATNRTPHVVAEMELLSEHQYDFKKHFKTANKKKYNPNG 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,759,441
Number of Sequences: 27780
Number of extensions: 256809
Number of successful extensions: 595
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)