Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_G04
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P1... 37 0.048
AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P1... 37 0.048
BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P1... 36 0.083
BC093694-1|AAH93694.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
BC093668-1|AAH93668.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
AL807246-2|CAH74028.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
AL590485-1|CAI17058.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
AL359252-1|CAH70147.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
AL357992-1|CAH70738.1| 406|Homo sapiens uronyl-2-sulfotransfera... 31 3.1
AB020316-1|BAA77510.1| 406|Homo sapiens dermatan/chondroitin su... 31 3.1
BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing ... 29 7.2
AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein. 29 7.2
>BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.048
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -2
Query: 373 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 206
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 205 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 56
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.048
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -2
Query: 373 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 206
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 205 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 56
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 35.9 bits (79), Expect = 0.083
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = -2
Query: 373 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 206
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGVAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 205 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 56
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC093694-1|AAH93694.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>BC093668-1|AAH93668.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>AL807246-2|CAH74028.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>AL590485-1|CAI17058.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>AL359252-1|CAH70147.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>AL357992-1|CAH70738.1| 406|Homo sapiens uronyl-2-sulfotransferase
protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>AB020316-1|BAA77510.1| 406|Homo sapiens dermatan/chondroitin
sulfate 2-sulfotransferase protein.
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 178 RISYLFKYYWNCGVKATFRFLVE---LPTHTSNAAFKTYDFISSSLETPEPTDXKKRNED 8
R+ Y +++Y VK F L L +H S + + FI + LET EP D ++++++
Sbjct: 340 RMRYEYEFYHY--VKEQFHLLKRKFGLKSHVSKPPLRPHFFIPTPLETEEPIDDEEQDDE 397
>BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 57 DEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 173
+++ S L+ L+V GN TKN+ + LT PQF +L++ +
Sbjct: 151 EKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
>AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein.
Length = 200
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 57 DEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 173
+++ S L+ L+V GN TKN+ + LT PQF +L++ +
Sbjct: 151 EKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,334,859
Number of Sequences: 237096
Number of extensions: 1393835
Number of successful extensions: 5346
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5346
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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