Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_G03
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456441-1|CAG30327.1|  749|Homo sapiens dJ1042K10.2 protein.          76   8e-14
BC008078-1|AAH08078.1|  749|Homo sapiens RUN and TBC1 domain con...    76   8e-14
AY308849-1|AAQ81879.1|  749|Homo sapiens merlin binding protein ...    76   8e-14
AL022238-3|CAA18266.1|  777|Homo sapiens protein ( Human DNA seq...    76   8e-14
AB275763-1|BAF63513.1|  749|Homo sapiens small G protein signali...    76   8e-14
AB196956-1|BAE02561.1|  749|Homo sapiens Rab-GTPase-activating-p...    76   8e-14

>CR456441-1|CAG30327.1|  749|Homo sapiens dJ1042K10.2 protein.
          Length = 749

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 701 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 747


>BC008078-1|AAH08078.1|  749|Homo sapiens RUN and TBC1 domain
           containing 3 protein.
          Length = 749

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 701 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 747


>AY308849-1|AAQ81879.1|  749|Homo sapiens merlin binding protein
           protein.
          Length = 749

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 701 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 747


>AL022238-3|CAA18266.1|  777|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1042K10 on chromosome
           22q13.1-13.2.  ).
          Length = 777

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 729 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 775


>AB275763-1|BAF63513.1|  749|Homo sapiens small G protein signaling
           modulator 3 protein protein.
          Length = 749

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 701 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 747


>AB196956-1|BAE02561.1|  749|Homo sapiens
           Rab-GTPase-activating-protein-like protein protein.
          Length = 749

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -2

Query: 597 CELRILSQFGFXLNPDWELPLXKDTXNQPLKEGVRDMLVKHHLFSWDL 454
           CELR+L  F F L+ DWELP  ++   QPLKEGVRDMLVKHHLFSWD+
Sbjct: 701 CELRVLCCFAFSLSQDWELPAKREA-QQPLKEGVRDMLVKHHLFSWDV 747


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,457,746
Number of Sequences: 237096
Number of extensions: 1388872
Number of successful extensions: 1802
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)