Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_F17
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U29244-16|AAQ23126.1|  172|Caenorhabditis elegans Hypothetical p...    27   9.6  

>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
           protein C50C3.2 protein.
          Length = 2107

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 527 LCADVDKPTEDNFENSASRDKMEQLVKSLEQLSNSIERLH 408
           +CAD  +P ED   N     K+E L + +E     I   H
Sbjct: 804 ICADTIEPKEDESFNEVMVKKLEALTEEVENYKPRIVETH 843


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 491 FENSASRDKMEQLVKSLEQLSNSIERLHCDTNPCSSTEEK 372
           FEN   +++ EQL K++E+L++    L   T     +EE+
Sbjct: 106 FENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEE 145


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 491 FENSASRDKMEQLVKSLEQLSNSIERLHCDTNPCSSTEEK 372
           FEN   +++ EQL K++E+L++    L   T     +EE+
Sbjct: 106 FENEKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEE 145


>U29244-16|AAQ23126.1|  172|Caenorhabditis elegans Hypothetical
           protein ZK1248.19 protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -3

Query: 569 IRDQQEHLARLHFRLCADVDKPTEDNFENSASRDKMEQLVKSLEQLSNSIERL 411
           I++ Q+ + RL  R  A++++  E+N E    R+  E  V  L++    +ERL
Sbjct: 8   IKNAQKTIDRL-IRQLAEIEQE-ENNLEEDEYRELREDTVNQLQEYGKIVERL 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,449,100
Number of Sequences: 27780
Number of extensions: 326464
Number of successful extensions: 846
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)