Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_F14
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 47 9e-05
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 44 5e-04
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 44 5e-04
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 38 0.041
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 38 0.041
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 38 0.041
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 38 0.054
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 38 0.054
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 38 0.054
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 38 0.054
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 38 0.054
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 38 0.054
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 46.8 bits (106), Expect = 9e-05
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = -1
Query: 673 AYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAK--VEELFEHFPARVIPXX 500
++P ++ IH++ P + +++ + EKIK R ++H + L +HFP ++P
Sbjct: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLE 244
Query: 499 XXXXXXXXEALVKKWRCRIDESRDFLRNLNE 407
E + ++W I +S D+LR+++E
Sbjct: 245 YGGEEFSMEDICQEWTNFIMKSEDYLRSISE 275
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 44.4 bits (100), Expect = 5e-04
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -1
Query: 673 AYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAK--VEELFEHFPARVIPXX 500
++P ++ IH++ P + +++ + EKIK R ++H + L +HFP ++P
Sbjct: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLE 244
Query: 499 XXXXXXXXEALVKKWRCRIDESRDFLRNLNE 407
E + ++W I +S D+L +++E
Sbjct: 245 YGGEEFSMEDICQEWTNFIMKSEDYLSSISE 275
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 44.4 bits (100), Expect = 5e-04
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -1
Query: 673 AYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAK--VEELFEHFPARVIPXX 500
++P ++ IH++ P + +++ + EKIK R ++H + L +HFP ++P
Sbjct: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLE 244
Query: 499 XXXXXXXXEALVKKWRCRIDESRDFLRNLNE 407
E + ++W I +S D+L +++E
Sbjct: 245 YGGEEFSMEDICQEWTNFIMKSEDYLSSISE 275
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 37.9 bits (84), Expect = 0.041
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLH-AKVEELFEHFPARVI 509
+ Q +P R+ +HVV P +++ + EKI R++LH + + L + P ++
Sbjct: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
Query: 508 P 506
P
Sbjct: 271 P 271
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 37.9 bits (84), Expect = 0.041
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLH-AKVEELFEHFPARVI 509
+ Q +P R+ +HVV P +++ + EKI R++LH + + L + P ++
Sbjct: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
Query: 508 P 506
P
Sbjct: 271 P 271
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 37.9 bits (84), Expect = 0.041
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLH-AKVEELFEHFPARVI 509
+ Q +P R+ +HVV P +++ + EKI R++LH + + L + P ++
Sbjct: 211 ILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
Query: 508 P 506
P
Sbjct: 271 P 271
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 679 QAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLH-AKVEELFEHFPARVIP 506
Q +P R+ +HVV P +++ + EKI R++LH + + L + P ++P
Sbjct: 179 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILP 237
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAKVEELFEHFPARVIP 506
L + A+P RL ++ +VGAP + ++ + +K++ R + K E+ +H P +P
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQI-LKTSEVTQHLPRECLP 232
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAKVEELFEHFPARVIP 506
L + A+P RL ++ +VGAP + ++ + +K++ R + K E+ +H P +P
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQI-LKTSEVTQHLPRECLP 232
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAKVEELFEHFPARVIP 506
L + A+P RL ++ +VGAP + ++ + +K++ R + K E+ +H P +P
Sbjct: 164 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQI-LKTSEVTQHLPRECLP 222
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = -1
Query: 685 LAQAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLHAKVEELFEHFPARVIP 506
L + A+P RL ++ +VGAP + ++ + +K++ R + K E+ +H P +P
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQI-LKTSEVTQHLPRECLP 232
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 37.5 bits (83), Expect = 0.054
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 679 QAAYPQRLXRIHVVGAPTFLASSLQLMRNCVNEKIKRRYYLH-AKVEELFEHFPARVIP 506
Q +P R+ +HVV P +++ + EKI R++LH + + L + P ++P
Sbjct: 179 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILP 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,804,870
Number of Sequences: 237096
Number of extensions: 1700516
Number of successful extensions: 2508
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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