Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_E17
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0610 - 23636097-23638958                                         29   3.6  
04_04_0170 - 23268714-23268950,23269040-23269303,23269379-232694...    28   6.2  

>01_05_0610 - 23636097-23638958
          Length = 953

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 332 EIVNISYHFNFILKKSV*LLSIAEAMTTFKKQENTC 225
           ++VN+S+HF+ I+   V LL +   M   ++  NTC
Sbjct: 892 DLVNMSFHFSMIIGFMVGLLLVFYFMLFSRRWRNTC 927


>04_04_0170 -
           23268714-23268950,23269040-23269303,23269379-23269494,
           23269574-23269792,23269961-23270080,23270170-23270283,
           23271870-23271946,23272527-23272657
          Length = 425

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 169 EKKLKTKEFIYEHILYVYKQVFSCFLNVVIASAIDSS 279
           E++L  KE+++E     Y+ +  C + VVI   +  S
Sbjct: 54  EEELLAKEYLFEEAFEGYEILLGCLITVVIVGVVSIS 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,888,019
Number of Sequences: 37544
Number of extensions: 180278
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)