Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_E10
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 39 0.004
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 38 0.009
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 38 0.009
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 34 0.11
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 33 0.24
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 0.92
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 0.98
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 31 1.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 30 2.3
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 29 3.0
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 29 4.0
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 5.2
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 5.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical pr... 28 6.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 28 9.1
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 28 9.1
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 28 9.1
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = -3
Query: 621 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 442
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 441 CIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 343
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = -3
Query: 621 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 442
PI + LG + ++ F H + + A F L ++ +K + + LYKT
Sbjct: 170 PIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKT 226
Query: 441 CIRPVMTYASVVFAHAARIHLKSFQIIQSRFCR 343
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 227 FIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -3
Query: 621 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 442
PI + + LG+ DS++TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 441 CIRPVMTYASVVFA 400
I P++ Y S V++
Sbjct: 245 YILPLIEYGSAVYS 258
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -3
Query: 621 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 442
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 441 CIRPVMTYASVVFA 400
+ P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -2
Query: 259 NELLEKYQDALSDYEKALELDPSLE-ETRKAVVRLKPIVEAXXXXXXXXXXXXXXXXGNM 83
+ + EKY++++ DY++ E P E + + + + GN
Sbjct: 102 SNMSEKYENSIEDYKQLQESLPKRRVELDRKIAEINEKINNRNEAMKADVMEKLKGFGNF 161
Query: 82 ILKPFGLSTENFNM 41
L PFGLST++F M
Sbjct: 162 CLSPFGLSTDSFEM 175
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.8 bits (54), Expect(2) = 0.92
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 683 SRLGASTPPPPP 648
SR G S+PPPPP
Sbjct: 131 SRAGGSSPPPPP 142
Score = 23.8 bits (49), Expect(2) = 0.92
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 674 GASTPPPPPFAQSRCSTSPYRGP 606
G+S PPPPP R T P R P
Sbjct: 135 GSSPPPPPPPRVPR--TPPPRSP 155
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 741 STAVLFKRGRPPNTTXSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 604
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 687 PLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 526
PLP+ P+ VRP T FD IP+ ++G + T + R RA
Sbjct: 893 PLPSFNGRPPS-VVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -2
Query: 253 LLEKYQDALSDYEKALELDPSLE---ETRKAVVRL 158
L +KY AL +YE AL LDP+ + E RK V+R+
Sbjct: 733 LNQKYDLALKEYEIALILDPTSDVARENRKKVIRI 767
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 741 STAVLFKRGRPPNTTXSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 604
ST + PP T P P R+ P+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 681 PTRRVNTPAPAVRPITMFDQPIPW 610
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 723 KRGRPPNTTXSIPLPTRRVNTPAPAVRPITMFDQPIPWAP 604
K +PP +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 268 ASSNELLEKYQDALSDYEKALELDPSLE-ETRK 173
A+ + +EKY +AL+ +KA+E DP E ETR+
Sbjct: 223 ATCLKFMEKYDEALAVLQKAVEYDPRNELETRE 255
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 274 QRASSNELLEKYQDALSDYEKALELDPSLEETR 176
QRA + E+Y A++DYEKA E D S + R
Sbjct: 331 QRAEAYMADEEYDMAIADYEKAEEWDSSNDAVR 363
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 244 KYQDALSDYEKALELDPSL 188
+Y DAL+ Y KA+EL+P++
Sbjct: 39 QYSDALTHYHKAIELNPTM 57
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 322 PRGSDGYPAKTGLNNLKG 375
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 322 PRGSDGYPAKTGLNNLKG 375
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 322 PRGSDGYPAKTGLNNLKG 375
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -1
Query: 806 RPRLPPWDXXXXXGAXTSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPP 648
RP PP T P Q S++G A R P P G TPPPPP
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP---QDLSTEGNASRRP---PPPPKGTGTPPPPP 203
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 665 LTRLVGRGMLXVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 790
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical
protein T05D4.3 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 668 STPPPPPF-AQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAT 531
S P PPP+ Q+ P R ++ N ++VG +S PTSRR+ T
Sbjct: 48 SRPAPPPYIGQAIPRVKPIRTFQKGN-----NSVGENSRPTSRRFDT 89
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -1
Query: 758 TSTPRKAQRCSSKGVALRTPR*ASPSRLGASTPPPPPFAQSRCSTSPYRGPRRSN-I*AS 582
TS A SS T + +PS G+STP P P + S G S+ +
Sbjct: 1243 TSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEMTSHGSTQT 1302
Query: 581 PSTVG 567
PST+G
Sbjct: 1303 PSTIG 1307
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 313 PDEPRGSDGYPAKTGLNNLKGF*VYAGRVSEH 408
P+ PRG G P +TG + +G GR+ EH
Sbjct: 153 PNGPRGPTGPPGETGPSGPEGPPGNPGRIGEH 184
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 155 ADRGSQE*GDEERDAGETQGSGEHDTEAVRSVHGE 51
+D G + EE D GE +G+GE S +GE
Sbjct: 252 SDNGEESDNGEESDNGEERGNGEASDNGDESDNGE 286
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 687 PLPTRRVNTPAPAVRPITMFDQPIPWAPKVKYLG 586
PLP +N +P VRP+ F + P K LG
Sbjct: 42 PLPPPTINIESPPVRPLKAFISSAYYYPTSKSLG 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,966,036
Number of Sequences: 27780
Number of extensions: 403730
Number of successful extensions: 1990
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1961
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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