Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_E10
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    27   0.27 
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    24   1.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.8  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 690 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKVKY 592
           +PLP    N P P  RP   F    P+ PK+K+
Sbjct: 21  VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 690 IPLPTRRVNTPAPAVRPITMFDQPIPWAPKV 598
           +PLP    N P P  RP   F    P+ PK+
Sbjct: 7   VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 674  GASTPPPPPFAQSRCSTSPYRGPRRSN 594
            G+  PPPPP      + S +   + SN
Sbjct: 1855 GSPEPPPPPPRNHDQNNSSFNDSKESN 1881


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 607 GPRYGLVEHRDWANGGG 657
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 607 GPRYGLVEHRDWANGGG 657
           GPR GL+    W  GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,066
Number of Sequences: 438
Number of extensions: 5088
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)