Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_E03
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein. 31 3.6
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL512424-2|CAI14256.1| 380|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1 (Drosoph... 31 3.6
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein. 31 3.6
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein. 31 3.6
>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AY029183-1|AAK31796.1| 798|Homo sapiens SLIT1 isoform B protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 14 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 57
>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AL512424-4|CAI14259.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AL512424-3|CAI14257.1| 409|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 409
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AL512424-2|CAI14256.1| 380|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 380
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AL512424-1|CAI14255.1| 782|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 782
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 14 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 57
>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1534
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AL442123-3|CAH70917.1| 1461|Homo sapiens slit homolog 1
(Drosophila) protein.
Length = 1461
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
Length = 1534
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 31 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 74
>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
Length = 1618
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 339 AGACPALALCTGTVAE*FPFNLQELIFGYNCDRQTDRTPYGYHNLS 476
A ACPAL CTGT + LQ + N R T+R +N++
Sbjct: 115 ASACPALCTCTGTTVDCHGTGLQAI--PKNIPRNTERLELNGNNIT 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,272,736
Number of Sequences: 237096
Number of extensions: 1163277
Number of successful extensions: 2435
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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