Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_D22
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    29   0.062
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    29   0.062
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    29   0.062
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    29   0.062
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   1.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   4.1  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   5.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   7.1  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   9.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.4  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 126 HPMRVSKPINTIAEITLPTTIY 191
           HP+RV+K I+ IA IT P   +
Sbjct: 454 HPIRVAKTIDVIARITFPVAYF 475


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 126 HPMRVSKPINTIAEITLPTTIY 191
           HP+RV+K I+ IA IT P   +
Sbjct: 440 HPIRVAKTIDVIARITFPVAYF 461


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 126 HPMRVSKPINTIAEITLPTTIY 191
           HP+RV+K I+ IA IT P   +
Sbjct: 474 HPIRVAKTIDVIARITFPVAYF 495


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 126 HPMRVSKPINTIAEITLPTTIY 191
           HP+RV+K I+ IA IT P   +
Sbjct: 423 HPIRVAKTIDVIARITFPVAYF 444


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 462 AQSVHKSQNVPKYDSFLPLTLSQEHSPHLHSPLPKQT 572
           A + H   + P   S  P  +   H+PH H P P +T
Sbjct: 437 AATPHHQHSTPLAHSSYPAAIQIGHTPHHH-PHPPET 472


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 532 SCDKVSGKNESYFGTFCDLCTDCAAKYC 449
           S D+ S   ESY          CA+KYC
Sbjct: 60  SIDRSSIHEESYLAESSRSIDPCASKYC 87


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 298 KLLDNGTSIVFKYHHEDNKLFLTIQKEKQIPPKANLY 188
           K + N  +  + Y++   KL+  I   +QIP    +Y
Sbjct: 88  KTIHNNNNYKYNYNNNCKKLYYNINYIEQIPIPVPVY 124


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 750 VSPDIQVTRANMMIICV*VTAKREH 676
           V PD +VT + +  +CV ++++ E+
Sbjct: 92  VEPDSKVTYSGLWRVCVAISSRMEY 116


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 757 CICKPGYSGDTCEYDDNLC 701
           C CKPGY  D  + +   C
Sbjct: 247 CHCKPGYQADVEKQECTEC 265


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 616 QDTYSSEATSPLDNYIYPYSMFPFXSYSYTNYHH 717
           Q + SS +TSP        SM+P+ S +  ++HH
Sbjct: 70  QHSGSSASTSPAARTTS--SMYPYVSAAAAHHHH 101


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +2

Query: 140 QQANQYNSRDHTTHNNI*ISFRRYLLFLLYSQKKFIVLVVVFEHNRCSV 286
           +++  ++S D+T  N+   S + YL    +     I  V + E  +CS+
Sbjct: 357 ERSRSWSSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVKIDEDQKCSI 405


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 181 VGSVISAIVLIGLLTLIGWKVLTDI 107
           VG++I    L GLL+++G+K +T +
Sbjct: 295 VGTLIVG-ALAGLLSVLGYKYITPL 318


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 556 GECKCGECSCDKVSGKN 506
           G C+ G C C K S K+
Sbjct: 72  GHCEKGVCICRKTSFKD 88


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 25  GFRNKDLKHQSRRLWPLLPLSCIPFDRRYLLK 120
           GF     +++  + W  + +S + FD++ LLK
Sbjct: 353 GFLQPVCQNEMNKWWWNMKISNLSFDKQSLLK 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,724
Number of Sequences: 438
Number of extensions: 5549
Number of successful extensions: 49
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)