Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_D21
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 385 e-107
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 72 4e-13
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 71 1e-12
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 67 1e-11
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 36 0.025
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 36 0.025
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 36 0.025
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.8
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.9
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.9
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.6
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 385 bits (948), Expect = e-107
Identities = 187/204 (91%), Positives = 195/204 (95%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK 599
YFRDQEGQDVLLFID IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTKK
Sbjct: 301 YFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKK 360
Query: 598 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN 419
GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAEL IYPAVDPLDSTSRIMDPN
Sbjct: 361 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPN 420
Query: 418 IIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVA 239
++G HY++ARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RARKIQRFLSQPFQVA
Sbjct: 421 VVGQNHYDIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVA 480
Query: 238 EVFTGHAGKLVPLEETIKGFSKIL 167
EVFTGH GK V LEETI+GF+ IL
Sbjct: 481 EVFTGHQGKFVSLEETIRGFTMIL 504
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3
Query: 162 GDYDHLPEVAFYMVGPIEEVVAKAETLAK 76
G+ DHLPEVAFYM G I++V KAE LAK
Sbjct: 506 GELDHLPEVAFYMQGGIDDVFKKAEELAK 534
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 72.1 bits (169), Expect = 4e-13
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK- 602
YFRD G +V + D R+ +A E+S LG +P+ GY LA + + ER K
Sbjct: 325 YFRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKC 383
Query: 601 ------KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDST 440
+GS+T V A+ P D DP + T + L + +A+ +P+++ L S
Sbjct: 384 LGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISY 443
Query: 439 SRIM-------DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 281
S M + N E ++ ++ILQ+ + L +I+ ++G L+E DK+T+ A
Sbjct: 444 SEYMRALEEFYEKNY--PEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEVA 501
Query: 280 RKIQ-RFLSQ 254
+ I+ FL Q
Sbjct: 502 KIIKDDFLQQ 511
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 70.5 bits (165), Expect = 1e-12
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK- 602
+F G+ VL+ + + + +A E+SA +P G+ + TD+ T+ ER K
Sbjct: 276 FFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKG 335
Query: 601 -KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM- 428
+GSIT + + +P +D+T P P T + + + + + IYP +D L S SR+M
Sbjct: 336 REGSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMK 395
Query: 427 ---DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FL 260
+ +H +++ + K +Q + A++G++ LS +D L + K ++ F+
Sbjct: 396 SAVGEGMTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFI 455
Query: 259 SQ 254
+Q
Sbjct: 456 AQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 67.3 bits (157), Expect = 1e-11
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Frame = -2
Query: 751 VLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQ 578
VL+ + + + +A EVSA +P G+ + TD+ T+ ER + GSIT +
Sbjct: 273 VLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIP 332
Query: 577 AIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IG 410
+ +P DD+T P P T + + R + IYP ++ L S SR+M I
Sbjct: 333 ILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTR 392
Query: 409 AEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 254
+H +V+ + K +Q + A++G + LS +D L + K ++ F++Q
Sbjct: 393 EDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQ 445
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 36.3 bits (80), Expect = 0.025
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK 599
+FRD G+ L+ D + + A ++S LL R P Y + + ER
Sbjct: 257 HFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN 315
Query: 598 ----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 431
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 316 SLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 36.3 bits (80), Expect = 0.025
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK 599
+FRD G+ L+ D + + A ++S LL R P Y + + ER
Sbjct: 249 HFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN 307
Query: 598 ----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 431
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 308 SLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 36.3 bits (80), Expect = 0.025
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = -2
Query: 778 YFRDQEGQDVLLFIDXIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK 599
+FRD G+ L+ D + + A ++S LL R P Y + + ER
Sbjct: 284 HFRDN-GKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNN 342
Query: 598 ----GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 431
GS+T++ I A D++ P + D L + G+ PA++ S SR+
Sbjct: 343 SLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 402
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -2
Query: 661 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 500
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -2
Query: 643 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 464
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 463 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 308
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -2
Query: 652 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 473
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 472 IYPAVDPLDSTSRIMDP 422
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -2
Query: 655 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 476
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -2
Query: 439 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 263
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 262 LSQ-PF 248
L + PF
Sbjct: 115 LRKIPF 120
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 569 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 670
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -2
Query: 700 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 521
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 520 HLDATTVLSRAIAELGIYPA 461
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,795,340
Number of Sequences: 27780
Number of extensions: 386175
Number of successful extensions: 1060
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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