Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_D21
         (779 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 512 IQVSKSGGWSRISQVISW 565
           ++ SKS GW ++  ++ W
Sbjct: 445 VKSSKSSGWRKLRNIVHW 462


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 6/33 (18%), Positives = 18/33 (54%)
 Frame = +2

Query: 467 VDTQFSNGSGEYSGSIQVSKSGGWSRISQVISW 565
           + +++ +   + S   ++ KS GW ++  ++ W
Sbjct: 196 LSSEWDSDYTDKSNEKKIPKSSGWRKLRNIVHW 228


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +2

Query: 524 KSGGWSRISQVISW 565
           KS GW ++  ++ W
Sbjct: 130 KSSGWRKLRNIVHW 143


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 292 LSTCLLQTTRPYP 330
           L  CLL+T R YP
Sbjct: 400 LERCLLETLRMYP 412


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 293 CQLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLS 409
           C LV F     ++N N       V KNF N  C  + L+
Sbjct: 84  CSLVEF-----SENKNCNAGSLTVKKNFANKYCGNITLN 117


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 362 VLKNFLNSTCNI 397
           +++N LNSTC++
Sbjct: 340 IVRNHLNSTCSV 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,618
Number of Sequences: 438
Number of extensions: 4946
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)