Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_D20
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.67 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   2.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +2

Query: 539 LQLHRPFNVMCNEDEPHTPSLPLLTSIDKPETLTCSTNSLTILQKLNTT 685
           ++  R  ++      PH P  P  T      T T +T + T     NTT
Sbjct: 633 MERERDASLSSTHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTT 681


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 545 LHRPFNVMCNEDEPHTPSLPLLTSIDKPETLTCSTNS 655
           + RPF V     +P+T  + +L S+D+ + L    N+
Sbjct: 460 MSRPFEVRY---DPYTQRVEILDSVDRLDNLMAQVNT 493


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,130
Number of Sequences: 438
Number of extensions: 4257
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)