Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_D10
(343 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 126 2e-29
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 126 2e-29
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 126 2e-29
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 126 2e-29
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 126 2e-29
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 126 2e-29
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 122 2e-28
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 96 3e-20
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 73 2e-13
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 72 5e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 72 5e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 67 1e-11
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein. 28 6.6
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein. 28 6.6
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo... 28 6.6
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta... 28 6.6
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 28 6.6
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein. 28 6.6
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 126 bits (304), Expect = 2e-29
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAKNY 26
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 122 bits (295), Expect = 2e-28
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RMGESDDCIVRLTKKDGILAK 32
RMGESDD I+RL K DGI++K
Sbjct: 61 RMGESDDSILRLAKADGIVSK 81
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 95
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 94 RM 89
RM
Sbjct: 61 RM 62
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -1
Query: 214 NRLIHXKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 53
NR+I KDHAS+Q+ +A+VD TGR K Y +CGAIRRMGESDD I+RL K
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGR 140
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIADVDPATGR 140
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = -1
Query: 274 MQNDAGEFVDLYCPRKCSASNRLIHXKDHASVQLVIA 164
MQNDAGEFVDLY PRKCSASNR+I KDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
(S. cerevisiae) protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor
Tat-CT1 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 756 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 793
>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 312 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 199
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,781,380
Number of Sequences: 237096
Number of extensions: 959484
Number of successful extensions: 1974
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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