Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_D04
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ235268-1|ABB60047.1|  103|Homo sapiens epithelial mitogen F pr...    30   9.1  
DQ235264-1|ABB60043.1|  112|Homo sapiens epithelial mitogen B pr...    30   9.1  
AF108092-1|AAD27959.1|  603|Homo sapiens NUMB protein protein.         30   9.1  

>DQ235268-1|ABB60047.1|  103|Homo sapiens epithelial mitogen F
           protein.
          Length = 103

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 661 YYQDDKKVFVLFSTSRGKRCLRIRCYYNSCSG 566
           +++ +K +   F+   G+RCL+++  YN CSG
Sbjct: 67  HHELEKAICRCFTGYTGERCLKLKSPYNVCSG 98


>DQ235264-1|ABB60043.1|  112|Homo sapiens epithelial mitogen B
           protein.
          Length = 112

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 661 YYQDDKKVFVLFSTSRGKRCLRIRCYYNSCSG 566
           +++ +K +   F+   G+RCL+++  YN CSG
Sbjct: 76  HHELEKAICRCFTGYTGERCLKLKSPYNVCSG 107


>AF108092-1|AAD27959.1|  603|Homo sapiens NUMB protein protein.
          Length = 603

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +2

Query: 182 IRYLTPNKQTMRSTSESKISPSCIQPAVKASHTISPIVRNRWKKLYTKNVLTKQELAFQA 361
           +  + P   T + T   + S +      +A H  +P   +RW +  +KNV  +Q  A  A
Sbjct: 354 VTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKNVRAQQPQASAA 413

Query: 362 P 364
           P
Sbjct: 414 P 414


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,836,839
Number of Sequences: 237096
Number of extensions: 1716813
Number of successful extensions: 3034
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3034
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)