Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_D02
         (463 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1472|AAF58520.1|  166|Drosophila melanogaster CG8836-PA...    29   3.0  
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         28   5.3  

>AE013599-1472|AAF58520.1|  166|Drosophila melanogaster CG8836-PA
           protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +2

Query: 86  YRSIANRDHSLLDIIKYSKSFYKRYYNTYIKFI*KLSSFQRRVIRSNNQI 235
           YR +  R+  L ++ ++   FYK+ YN YI      ++ Q R++  NN +
Sbjct: 34  YRDLYYRNRDLYNLRRFYDGFYKK-YNPYI------AAAQARIVEQNNDV 76


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -1

Query: 361 QTVKYFI*TTL*CYIRIVIVCVERSMHINVPIG--FEVCFNVXLD 233
           QT  Y +  ++  Y R++IVC ++SM  NV +G  F    N+ LD
Sbjct: 465 QTTCYVLKGSIKIYFRLIIVC-DQSMRYNVILGRDFLTACNLNLD 508


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,816,733
Number of Sequences: 53049
Number of extensions: 270086
Number of successful extensions: 404
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)