Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C21
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0742 + 19200045-19200053,19200158-19200437,19201331-192015...    28   5.8  
06_02_0321 - 14355058-14355681                                         28   7.6  

>04_03_0742 +
           19200045-19200053,19200158-19200437,19201331-19201545,
           19201705-19201792,19202277-19202842
          Length = 385

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 373 PYIPLAPNSLRDSPLPEDSHPAAAGSRLRASTSPRNCSV 489
           PY P  P   + S  P  SHP+   S++ +  +P  CSV
Sbjct: 346 PYPPSYPPPYQPSYPPYPSHPSHHPSQIFSDENPNACSV 384


>06_02_0321 - 14355058-14355681
          Length = 207

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 376 YIPLAPNSLRDSPLPEDSHPA 438
           Y+PLAPN + +SP+P   + A
Sbjct: 166 YVPLAPNFVSNSPIPSSHYIA 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,686,147
Number of Sequences: 37544
Number of extensions: 323909
Number of successful extensions: 805
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)