Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C21
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99721-1|CAA68061.1|  219|Homo sapiens transcription factor TFE3...    31   4.9  
X96717-1|CAA65478.1|  575|Homo sapiens transcription factor TFE3...    31   4.9  
BX572102-1|CAI95779.1|  575|Homo sapiens transcription factor bi...    31   4.9  
BC026027-1|AAH26027.1|  575|Homo sapiens transcription factor bi...    31   4.9  

>X99721-1|CAA68061.1|  219|Homo sapiens transcription factor TFE3
           protein.
          Length = 219

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 497 SDVPKEIVLSVPEIREFPANEDLVQARHHQXEQFRRTVLAPK 622
           + VP+E VL V    E P    L QAR  Q +Q+  T L PK
Sbjct: 170 AQVPRE-VLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPK 210


>X96717-1|CAA65478.1|  575|Homo sapiens transcription factor TFE3
           protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 497 SDVPKEIVLSVPEIREFPANEDLVQARHHQXEQFRRTVLAPK 622
           + VP+E VL V    E P    L QAR  Q +Q+  T L PK
Sbjct: 170 AQVPRE-VLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPK 210


>BX572102-1|CAI95779.1|  575|Homo sapiens transcription factor
           binding to IGHM enhancer 3 protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 497 SDVPKEIVLSVPEIREFPANEDLVQARHHQXEQFRRTVLAPK 622
           + VP+E VL V    E P    L QAR  Q +Q+  T L PK
Sbjct: 170 AQVPRE-VLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPK 210


>BC026027-1|AAH26027.1|  575|Homo sapiens transcription factor
           binding to IGHM enhancer 3 protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +2

Query: 497 SDVPKEIVLSVPEIREFPANEDLVQARHHQXEQFRRTVLAPK 622
           + VP+E VL V    E P    L QAR  Q +Q+  T L PK
Sbjct: 170 AQVPRE-VLKVQTHLENPTRYHLQQARRQQVKQYLSTTLGPK 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,594,798
Number of Sequences: 237096
Number of extensions: 1786982
Number of successful extensions: 4105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4105
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)