Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C20
         (325 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...   115   2e-26
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...   115   2e-26
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...   115   2e-26
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...   112   9e-26
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ...    29   1.4  
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl...    29   1.8  
AY561850-1|AAS68533.1|  970|Drosophila melanogaster gag protein ...    28   3.2  
AJ566116-1|CAD92792.1|  970|Drosophila melanogaster gag protein ...    28   3.2  
AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl cyc...    28   3.2  
AE014298-2169|AAX52499.1| 1690|Drosophila melanogaster CG9210-PB...    28   3.2  
AE014298-2168|AAF48468.1| 1690|Drosophila melanogaster CG9210-PA...    28   3.2  
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro...    27   4.2  
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro...    27   4.2  
AY069731-1|AAL39876.1|  934|Drosophila melanogaster LP03809p pro...    27   4.2  
AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro...    27   4.2  
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA...    27   4.2  
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA...    27   4.2  
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    27   4.2  
AY118407-1|AAM48436.1|  282|Drosophila melanogaster RE62293p pro...    27   7.3  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score =  115 bits (276), Expect = 2e-26
 Identities = 60/100 (60%), Positives = 66/100 (66%)
 Frame = -3

Query: 302 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXX 123
           VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNIGSGV  
Sbjct: 10  VYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGA 69

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
                                          +SDDDMGFG
Sbjct: 70  APAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFG 109


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score =  115 bits (276), Expect = 2e-26
 Identities = 60/100 (60%), Positives = 66/100 (66%)
 Frame = -3

Query: 302 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXX 123
           VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNIGSGV  
Sbjct: 10  VYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGA 69

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
                                          +SDDDMGFG
Sbjct: 70  APAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFG 109


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score =  115 bits (276), Expect = 2e-26
 Identities = 60/100 (60%), Positives = 66/100 (66%)
 Frame = -3

Query: 302 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXX 123
           VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLITNIGSGV  
Sbjct: 10  VYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGA 69

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
                                          +SDDDMGFG
Sbjct: 70  APAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFG 109


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score =  112 bits (270), Expect = 9e-26
 Identities = 59/100 (59%), Positives = 65/100 (65%)
 Frame = -3

Query: 302 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXX 123
           VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLITNIGSGV  
Sbjct: 10  VYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGA 69

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFG 3
                                          +SDDDMGFG
Sbjct: 70  APAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFG 109


>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 148 VIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 249
           +I S+ L+P+K   N P QY  T+   A K  +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 157 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 285
           S+  +P+K   N P QY  T+   A K  +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452


>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
           single-stranded nucleicacid binding protein protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 157 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 285
           S+  +P+K   N P QY  T+   A K  +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452



 Score = 27.5 bits (58), Expect = 4.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 157 SRTLMPSKALANRPGQYGSTSTAAAFKMVEI 249
           S+ L+P+K   N P QY  T+   A K  +I
Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288


>AY561850-1|AAS68533.1|  970|Drosophila melanogaster gag protein
           protein.
          Length = 970

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 157 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 285
           S+  +P+K   N P QY  T+   A K  +  SP    S  T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375


>AJ566116-1|CAD92792.1|  970|Drosophila melanogaster gag protein
           protein.
          Length = 970

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 157 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 285
           S+  +P+K   N P QY  T+   A K  +  SP    S  T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375


>AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl cyclase
            isoform DAC9 protein.
          Length = 1708

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 204  IWLYIYSRRFQDGGNFLTSYGNIIIHQDESRVNN 305
            + ++  +R F+ G   LT YGN + +QD+ RV N
Sbjct: 1316 VLVWFLNREFEIGYR-LTFYGNAVANQDKVRVQN 1348


>AE014298-2169|AAX52499.1| 1690|Drosophila melanogaster CG9210-PB,
            isoform B protein.
          Length = 1690

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 204  IWLYIYSRRFQDGGNFLTSYGNIIIHQDESRVNN 305
            + ++  +R F+ G   LT YGN + +QD+ RV N
Sbjct: 1316 VLVWFLNREFEIGYR-LTFYGNAVANQDKVRVQN 1348


>AE014298-2168|AAF48468.1| 1690|Drosophila melanogaster CG9210-PA,
            isoform A protein.
          Length = 1690

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 204  IWLYIYSRRFQDGGNFLTSYGNIIIHQDESRVNN 305
            + ++  +R F+ G   LT YGN + +QD+ RV N
Sbjct: 1316 VLVWFLNREFEIGYR-LTFYGNAVANQDKVRVQN 1348


>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
          Length = 1840

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 130  TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 282
            TP       S +     + A+ PGQ  +TS+ A        S  T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588


>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
          Length = 1840

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 130  TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 282
            TP       S +     + A+ PGQ  +TS+ A        S  T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588


>AY069731-1|AAL39876.1|  934|Drosophila melanogaster LP03809p
           protein.
          Length = 934

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 130 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 282
           TP       S +     + A+ PGQ  +TS+ A        S  T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682


>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein.
          Length = 1712

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 191  TDLANMALHLQPPLSRWWKFSHQLRQHHH 277
            + ++N +L+L+ P     K  H  R+HHH
Sbjct: 969  SSISNQSLNLEEPPPPMGKHHHHHREHHH 997


>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
            protein.
          Length = 1712

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 191  TDLANMALHLQPPLSRWWKFSHQLRQHHH 277
            + ++N +L+L+ P     K  H  R+HHH
Sbjct: 969  SSISNQSLNLEEPPPPMGKHHHHHREHHH 997


>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
            protein.
          Length = 1837

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 130  TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 282
            TP       S +     + A+ PGQ  +TS+ A        S  T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585


>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 200  ANMALHLQPPLSRWWKFSHQLRQHHH 277
            AN A+H   P        H+ RQHHH
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHH 1860


>AY118407-1|AAM48436.1|  282|Drosophila melanogaster RE62293p
           protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 139 PMLVIRSRTLMPS-KALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 294
           P+++I ++  + S + +    G+  STS+AA F    +   +T+T  STR  A
Sbjct: 166 PLVLIANKVDLESQRRVTTEEGRNLSTSSAARFLRHRLHCVITSTRHSTRWSA 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,508,199
Number of Sequences: 53049
Number of extensions: 234589
Number of successful extensions: 824
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)