Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_C15
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533548-1|CAG38579.1| 379|Homo sapiens LYAR protein. 55 3e-07
BC015796-1|AAH15796.1| 379|Homo sapiens hypothetical protein FL... 55 3e-07
AK000432-1|BAA91162.1| 379|Homo sapiens protein ( Homo sapiens ... 55 3e-07
AF229835-1|AAF42870.1| 110|Homo sapiens apoptosis-related prote... 55 3e-07
U22816-1|AAC50173.1| 1202|Homo sapiens LAR-interacting protein 1... 30 7.5
U22815-1|AAC50172.1| 1185|Homo sapiens LAR-interacting protein 1... 30 7.5
BC034046-1|AAH34046.1| 1202|Homo sapiens protein tyrosine phosph... 30 7.5
AK128592-1|BAC87517.1| 1093|Homo sapiens protein ( Homo sapiens ... 30 7.5
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 30 7.5
AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy ch... 30 9.9
AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein. 30 9.9
AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein. 30 9.9
>CR533548-1|CAG38579.1| 379|Homo sapiens LYAR protein.
Length = 379
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 290 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 120
E+ A GKFNW I ++L Q DNE+ K+L+KKVLA+Y T + ++ + F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358
Query: 119 IKKLKSAPNVRVDKNRVLLIE 57
KK+ P ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379
>BC015796-1|AAH15796.1| 379|Homo sapiens hypothetical protein
FLJ20425 protein.
Length = 379
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 290 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 120
E+ A GKFNW I ++L Q DNE+ K+L+KKVLA+Y T + ++ + F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358
Query: 119 IKKLKSAPNVRVDKNRVLLIE 57
KK+ P ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379
>AK000432-1|BAA91162.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ20425 fis, clone KAT02707. ).
Length = 379
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 290 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 120
E+ A GKFNW I ++L Q DNE+ K+L+KKVLA+Y T + ++ + F
Sbjct: 299 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 358
Query: 119 IKKLKSAPNVRVDKNRVLLIE 57
KK+ P ++ K++V L++
Sbjct: 359 NKKISKNPTFKLLKDKVKLVK 379
>AF229835-1|AAF42870.1| 110|Homo sapiens apoptosis-related protein
PNAS-5 protein.
Length = 110
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 290 EEVNAENNGKFNWHAVIMSVL-QKKDNEVPFKRLQKKVLAEYSEATGQ--EIDDRIADKF 120
E+ A GKFNW I ++L Q DNE+ K+L+KKVLA+Y T + ++ + F
Sbjct: 30 EDDEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIF 89
Query: 119 IKKLKSAPNVRVDKNRVLLIE 57
KK+ P ++ K++V L++
Sbjct: 90 NKKISKNPTFKLLKDKVKLVK 110
>U22816-1|AAC50173.1| 1202|Homo sapiens LAR-interacting protein 1b
protein.
Length = 1202
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 311 DQNVAKIEEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSEATG-QEIDDR 135
D + A+ + + +E V ++ QK+D E L+K+ LA EAT +++D+
Sbjct: 286 DLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDK 345
Query: 134 IADKFIKKLKSAPNVRVDKNRVL 66
+ ++ K S DKNR L
Sbjct: 346 LENEIANK-DSMHRQTEDKNRQL 367
>U22815-1|AAC50172.1| 1185|Homo sapiens LAR-interacting protein 1a
protein.
Length = 1185
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 311 DQNVAKIEEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSEATG-QEIDDR 135
D + A+ + + +E V ++ QK+D E L+K+ LA EAT +++D+
Sbjct: 286 DLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDK 345
Query: 134 IADKFIKKLKSAPNVRVDKNRVL 66
+ ++ K S DKNR L
Sbjct: 346 LENEIANK-DSMHRQTEDKNRQL 367
>BC034046-1|AAH34046.1| 1202|Homo sapiens protein tyrosine
phosphatase, receptor type, f polypeptide (PTPRF),
interacting protein.
Length = 1202
Score = 30.3 bits (65), Expect = 7.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 311 DQNVAKIEEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSEATG-QEIDDR 135
D + A+ + + +E V ++ QK+D E L+K+ LA EAT +++D+
Sbjct: 286 DLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDK 345
Query: 134 IADKFIKKLKSAPNVRVDKNRVL 66
+ ++ K S DKNR L
Sbjct: 346 LENEIANK-DSMHRQTEDKNRQL 367
>AK128592-1|BAC87517.1| 1093|Homo sapiens protein ( Homo sapiens
cDNA FLJ46751 fis, clone TRACH3022960, weakly similar
to Dynein beta chain, ciliary. ).
Length = 1093
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 233 VLQKKDNEVPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNRV 69
+LQ N+ K ++KK+L S + G ++D A K + K N K ++
Sbjct: 200 ILQSAANKKQLKDIEKKILETLSSSEGNILEDESAIKVLDSAKMMSNEITKKQQI 254
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 30.3 bits (65), Expect = 7.5
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = -1
Query: 658 KSCPKNNAKKRRNVRSMKQNCIVLKLPQLRMRLKMKEKKVRKRRTGLNHRMVTQ*RQLRL 479
K K KK++ + K+ K + R + K K+KK RKRR R + R+ R
Sbjct: 53 KKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRR 112
Query: 478 KSRR 467
+ RR
Sbjct: 113 RRRR 116
Score = 29.9 bits (64), Expect = 9.9
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = -1
Query: 658 KSCPKNNAKKRRNVRSMKQNCIVLKLPQLRMRLKMKEKKVRKRRTGLNHRMVTQ*RQLRL 479
K KN KK++ + K+ K + + R K + ++ R+RR R + R+ R
Sbjct: 61 KKKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRKRRRRRRRRRRRRRRRRRRRRRRRRRR 120
Query: 478 KSRRNVNVKIQL 443
+ RR K+ L
Sbjct: 121 RRRRRKEGKLTL 132
>AF327442-1|AAL37427.1| 4024|Homo sapiens ciliary dynein heavy chain 7
protein.
Length = 4024
Score = 29.9 bits (64), Expect = 9.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 233 VLQKKDNEVPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNRV 69
+LQ +N+ K ++ K+L S + G ++D A K + K+ N K V
Sbjct: 3134 ILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQKQEV 3188
>AC068919-1|AAY14995.1| 2536|Homo sapiens unknown protein.
Length = 2536
Score = 29.9 bits (64), Expect = 9.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 233 VLQKKDNEVPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNRV 69
+LQ +N+ K ++ K+L S + G ++D A K + K+ N K V
Sbjct: 1859 ILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQKQEV 1913
>AB023161-1|BAA76788.2| 4031|Homo sapiens KIAA0944 protein protein.
Length = 4031
Score = 29.9 bits (64), Expect = 9.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -3
Query: 233 VLQKKDNEVPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNRV 69
+LQ +N+ K ++ K+L S + G ++D A K + K+ N K V
Sbjct: 3141 ILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQKQEV 3195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,332,168
Number of Sequences: 237096
Number of extensions: 1066254
Number of successful extensions: 2304
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2290
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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