Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_C15
(736 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 38 0.014
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 38 0.014
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 38 0.014
U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian pr... 31 2.2
BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p pro... 31 2.2
AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA... 31 2.2
AF080444-1|AAD29852.1| 268|Drosophila melanogaster pugilistDomi... 29 6.6
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr... 29 8.7
AY069690-1|AAL39835.1| 494|Drosophila melanogaster LD46328p pro... 29 8.7
AE014297-2874|AAF55812.2| 494|Drosophila melanogaster CG33094-P... 29 8.7
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA... 29 8.7
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.014
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 236 SVLQKKDNEVPFKR-LQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNR 72
+++QK+ + FK+ L+ K+L TGQ+IDD I D I +KSA N NR
Sbjct: 256 AIIQKRTDLTKFKKNLENKILLNTEIRTGQDIDDCI-DILINNIKSAANEATPPNR 310
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.014
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 236 SVLQKKDNEVPFKR-LQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNR 72
+++QK+ + FK+ L+ K+L TGQ+IDD I D I +KSA N NR
Sbjct: 256 AIIQKRTDLTKFKKNLENKILLNTEIRTGQDIDDCI-DILINNIKSAANEATPPNR 310
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.014
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3
Query: 236 SVLQKKDNEVPFKR-LQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNR 72
+++QK+ + FK+ L+ K+L TGQ+IDD I D I +KSA N NR
Sbjct: 256 AIIQKRTDLTKFKKNLENKILLNTEIRTGQDIDDCI-DILINNIKSAANEATPPNR 310
>U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian
protein.
Length = 993
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 317 LHDQNVAKI-EEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSE 162
+HDQ + ++ EN F+ ++Q K NEV ++ Q+KV E S+
Sbjct: 702 IHDQLFGNLARQIKPENRALFSELCTEQILMQIKPNEVKIRKKQRKVSTEVSD 754
>BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p
protein.
Length = 1004
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 317 LHDQNVAKI-EEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSE 162
+HDQ + ++ EN F+ ++Q K NEV ++ Q+KV E S+
Sbjct: 713 IHDQLFGNLARQIKPENRALFSELCTEQILMQIKPNEVKIRKKQRKVSTEVSD 765
>AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA
protein.
Length = 885
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 317 LHDQNVAKI-EEVNAENNGKFNWHAVIMSVLQKKDNEVPFKRLQKKVLAEYSE 162
+HDQ + ++ EN F+ ++Q K NEV ++ Q+KV E S+
Sbjct: 713 IHDQLFGNLARQIKPENRALFSELCTEQILMQIKPNEVKIRKKQRKVSTEVSD 765
>AF080444-1|AAD29852.1| 268|Drosophila melanogaster
pugilistDominant protein.
Length = 268
Score = 29.1 bits (62), Expect = 6.6
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 25 SFMFQIHIKIHSMSNTLF--LSTL--TLGALFSFFINLSAILSSISWPVASLYSANTFF* 192
S +F + + S+ ++LF LS+L L +LFS +L ++LSS+ ++SL+S +
Sbjct: 183 SSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSXLF 242
Query: 193 SLLNGTSLSFFCKTDIITACQLNLP 267
SLL+ + ++ + L+ P
Sbjct: 243 SLLSSLFSLLLSXSXLLCSXVLSPP 267
>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
protein.
Length = 2346
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Frame = -3
Query: 320 CLHDQNVAKIEEVNAENNG----KFNWHAVIMSVLQKKD-NEVPFKRLQ--KKVLAEYSE 162
C + + +KIEE+N EN W ++++K + N FKRLQ ++ LA+
Sbjct: 1317 CSNKELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNRNPEEFKRLQAEREHLAKLLT 1376
Query: 161 ATGQEIDDRIADKFIKKLKSAPNVRV 84
A +E++ + +D+ + LK N +
Sbjct: 1377 AE-KELNKKQSDE-LTVLKQRMNTEI 1400
>AY069690-1|AAL39835.1| 494|Drosophila melanogaster LD46328p
protein.
Length = 494
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = -3
Query: 263 KFNWHAVIMSVLQKKDNEVPFKRLQK---KVLAEYSEA 159
K N+H +M + ++KD E FK+ QK K+LA+ +A
Sbjct: 116 KENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKA 153
>AE014297-2874|AAF55812.2| 494|Drosophila melanogaster CG33094-PB
protein.
Length = 494
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = -3
Query: 263 KFNWHAVIMSVLQKKDNEVPFKRLQK---KVLAEYSEA 159
K N+H +M + ++KD E FK+ QK K+LA+ +A
Sbjct: 116 KENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKA 153
>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
protein.
Length = 2346
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Frame = -3
Query: 320 CLHDQNVAKIEEVNAENNG----KFNWHAVIMSVLQKKD-NEVPFKRLQ--KKVLAEYSE 162
C + + +KIEE+N EN W ++++K + N FKRLQ ++ LA+
Sbjct: 1317 CSNKELTSKIEEINVENTSLRTEAIKWRQRANALVEKSNRNPEEFKRLQAEREHLAKLLT 1376
Query: 161 ATGQEIDDRIADKFIKKLKSAPNVRV 84
A +E++ + +D+ + LK N +
Sbjct: 1377 AE-KELNKKQSDE-LTVLKQRMNTEI 1400
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,015,770
Number of Sequences: 53049
Number of extensions: 344381
Number of successful extensions: 1116
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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