Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C15
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.9  
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    22   6.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 265 ANLTGTQLLCQFCRRKIMKFH 203
           A   GT +LC+ C  K   FH
Sbjct: 58  AEFDGTTVLCRVCGDKASGFH 78


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 731 NNSQNDDADVKNVENPNGND 672
           NN+QND  +++N  N N N+
Sbjct: 416 NNNQND--NIQNTNNQNDNN 433


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 649 PKNNAKKRRNVRSMKQNCI 593
           P + +KK   VRS +Q+CI
Sbjct: 277 PSSTSKKSGIVRSHQQSCI 295


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 731 NNSQNDDADVKNVENPNGNDVG 666
           NN+ N++ +  N  N NGN  G
Sbjct: 241 NNNNNNNNNNNNGANDNGNGNG 262


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 253 GTQLLCQFCRRKIMKFH 203
           GT +LC+ C  K   FH
Sbjct: 4   GTTVLCRVCGDKASGFH 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,889
Number of Sequences: 438
Number of extensions: 2129
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)