Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C14
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpa...   130   8e-31
U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical p...   117   1e-26
AF144639-1|AAD44756.1|  552|Caenorhabditis elegans sphingosine-1...    29   2.6  
AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine p...    29   2.6  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine r...    28   6.1  
U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpase
           protein 15 protein.
          Length = 470

 Score =  130 bits (315), Expect = 8e-31
 Identities = 58/86 (67%), Positives = 71/86 (82%)
 Frame = -3

Query: 733 ELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNV 554
           E+++ L+ LLE S DP++L VA +DIGEYVRHYPRGK ++EQ  GK  VM LL+ +DPNV
Sbjct: 376 EVVKILIKLLESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNV 435

Query: 553 RYEALLAVQKLMVHNWEYLGKQLEKE 476
           RY ALLAVQKLMVHNWEYLGKQL+ +
Sbjct: 436 RYHALLAVQKLMVHNWEYLGKQLDSD 461


>U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical
           protein F52E1.10 protein.
          Length = 451

 Score =  117 bits (281), Expect = 1e-26
 Identities = 54/84 (64%), Positives = 69/84 (82%)
 Frame = -3

Query: 736 QELLRTLVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPN 557
           QELL+ LV +LEKS DP+VL VA +DIGE+VR+YPRGK  +EQLGGK+ +M LL+  DPN
Sbjct: 368 QELLKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPN 427

Query: 556 VRYEALLAVQKLMVHNWEYLGKQL 485
           VRY ALLA QKLM++NW+ LG ++
Sbjct: 428 VRYHALLAAQKLMINNWKDLGLEI 451


>AF144639-1|AAD44756.1|  552|Caenorhabditis elegans
           sphingosine-1-phosphate lyase protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = -3

Query: 718 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 545
           +VHL  KS DP++  +  Y +   +R  P  +  IE+     K +++  +  DD + ++ 
Sbjct: 48  VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106

Query: 544 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 440
           + L +  L   +   L K+ E     +   G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142


>AF100673-6|AAC69001.1|  552|Caenorhabditis elegans Sphingosine
           phosphate lyase protein1 protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = -3

Query: 718 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 545
           +VHL  KS DP++  +  Y +   +R  P  +  IE+     K +++  +  DD + ++ 
Sbjct: 48  VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106

Query: 544 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 440
           + L +  L   +   L K+ E     +   G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 414 VMSYKFYALAPTTVPACLSICSFSSCLPRYSQL*TISFCTASKASYRTFGSS*LRRYMTR 593
           +  Y+      T VPAC+  CS S+C+    Q  T S CT +  S  +  +  + + M R
Sbjct: 187 IQKYEITVEQETCVPACMPACS-SACV----QAVTCSTCTNNCPSICSQANC-IPQCMPR 240

Query: 594 CLP 602
           CLP
Sbjct: 241 CLP 243


>Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical
           protein F55C9.1 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -1

Query: 228 IQKYDRI*LCILHV*KLCFNYDLINIIYCVNHKTVHPLVAIWP*FCSCQTTFLKV 64
           I+ YD   L  L   + CF   LIN +YC+++ T + L      +CS  T  L +
Sbjct: 147 IKHYDTSELFQLEEARRCFKNILINRVYCLSNSTSNVLQ-----YCSISTELLTI 196


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 609  CSMMCLPRG*WRTYSPMS*QATASTTGS 692
            CS + +P G   TYSP S   T+ T+G+
Sbjct: 1055 CSALTIPSGAQATYSPFSLSTTSFTSGT 1082


>AF016449-10|AAG24001.2|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein5 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 19/83 (22%), Positives = 42/83 (50%)
 Frame = +2

Query: 494 AEIFPVVNHKFLHGEQGFVPYIRIVVTQEVHDTLFTTKLFDDVFAARIVAHIFSDVIASD 673
           AE+ P     FL G++ F+  I +++   ++ ++FT  +   +F+    +++F  +I  +
Sbjct: 136 AEVDPHFPLAFLFGKRIFIIVIFVLLCYGIYVSVFTQPI---IFSPEYASYLFDPLIGKN 192

Query: 674 GEYDRIAALLEQVHQGAKQFLTT 742
            ++ +   +L  VH      LTT
Sbjct: 193 PDFYQNYTIL--VHNAVTCVLTT 213


>U88184-3|AAK31519.1|  648|Caenorhabditis elegans Hypothetical
           protein F36H5.8 protein.
          Length = 648

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 265 IDVFLIKQSTFYV*LSFMNHNSI*ELFMNL*QHSINVTIATNYIFF*FTML 417
           +DV L+ Q+T Y  +  +NH  + E   N  + S+N  +A+N  F  FT L
Sbjct: 492 LDVELV-QTTDYQRMVVLNHTKLVETRTNRVKFSLNDLLASNASFLQFTNL 541


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,160,407
Number of Sequences: 27780
Number of extensions: 333742
Number of successful extensions: 746
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)