Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C10
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0167 + 5221910-5222516,5222826-5224642                           28   6.2  
06_01_0220 - 1673657-1675765                                           28   8.3  

>09_02_0167 + 5221910-5222516,5222826-5224642
          Length = 807

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
 Frame = +3

Query: 48  LGFRISLPVSSQDMLKSLSMERVRAVMMLGATTFLCTPIMNSKTNNVEVTAKKG*FHKDC 227
           LG ++   + SQ   KSL  E   +VM L A+ F    +M +  N+V + + +   ++  
Sbjct: 17  LGGQVLNEIRSQFGKKSLIFEVENSVMEL-ASEFR---VMQAFINHVGMCSHQNAAYEAW 72

Query: 228 VSETTGV---RGSINQWYAAIAVQTDT---IVSRILHLIVAGWRHAITSVKR-RSKAFKS 386
           + E   V      I + YA +  QT     ++  +LH  +  W H  T +K+  ++  K 
Sbjct: 73  LDEVKSVGFDAEDIIEEYAYLIAQTSNEGGLIKSVLHRSINAWCHIATQLKQIEARLQKL 132

Query: 387 VIMTTQY 407
             M  +Y
Sbjct: 133 TAMKDRY 139


>06_01_0220 - 1673657-1675765
          Length = 702

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 383 FESF*ASFN*SDSMSPTSYNEMENSTDNCVSLYSNSSIPLVDGSSDTCSL 234
           FE+F AS      + P +   ++  TD+C + Y N     V G  DTC+L
Sbjct: 404 FEAFSASA--PGRIDPATGYLLDELTDDCHADYRNLMAAAVRGDFDTCAL 451


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,656,087
Number of Sequences: 37544
Number of extensions: 285719
Number of successful extensions: 638
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)