Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C10
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 1...   171   2e-42
AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens ...   171   2e-42
BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.     49   1e-05
AB033065-1|BAA86553.2| 1164|Homo sapiens KIAA1239 protein protein.     30   9.2  

>BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 188
           protein.
          Length = 142

 Score =  171 bits (416), Expect = 2e-42
 Identities = 77/114 (67%), Positives = 92/114 (80%)
 Frame = -3

Query: 385 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 206
           DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 26  DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 85

Query: 205 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 44
           FF ++   L+ LF  G+H++VVAPSII AR R++L ++NMSCDDTGKLILKPRP
Sbjct: 86  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRP 139


>AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38101 fis, clone D3OST1000270. ).
          Length = 125

 Score =  171 bits (416), Expect = 2e-42
 Identities = 77/114 (67%), Positives = 92/114 (80%)
 Frame = -3

Query: 385 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 206
           DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 68

Query: 205 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 44
           FF ++   L+ LF  G+H++VVAPSII AR R++L ++NMSCDDTGKLILKPRP
Sbjct: 69  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRP 122


>BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.
          Length = 47

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
 Frame = -3

Query: 385 DLKAFERRLTEVIACLQPATMRWR-ILLTIV 296
           DLKAFERRLTE I CLQPAT RWR +LL I+
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRSVLLHII 39


>AB033065-1|BAA86553.2| 1164|Homo sapiens KIAA1239 protein protein.
          Length = 1164

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 477  LKICIIRSNVKTIYSKQLKHTNRPKFKSMMCKINASC 587
            LKI I  SN + I++    HT+RPK  S   KI+  C
Sbjct: 1075 LKIKIATSNSRQIFNNAT-HTSRPKCNSYCFKISVDC 1110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,693,144
Number of Sequences: 237096
Number of extensions: 1690750
Number of successful extensions: 7106
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7106
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)