Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_C10
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021571-5|CAA16513.2| 140|Caenorhabditis elegans Hypothetical ... 88 5e-18
AL021571-6|CAN99719.1| 142|Caenorhabditis elegans Hypothetical ... 88 7e-18
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 28 7.4
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68493-8|CAA92795.1| 336|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL021571-5|CAA16513.2| 140|Caenorhabditis elegans Hypothetical
protein T19A6.3a protein.
Length = 140
Score = 88.2 bits (209), Expect = 5e-18
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Frame = -3
Query: 385 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDP---LTPVVSLTQSLW 215
DLK FE+RLTEVI + P RWRI + I +V + + + + + + L
Sbjct: 18 DLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMIDMFLT 77
Query: 214 NHPFFAVTSTLLVLLFMI-GVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPAN 38
H F + + +LLF + GVHR++VAP+I+ R R L+ F++SCD GKLI+KP N
Sbjct: 78 THLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKPAVRN 137
Query: 37 SS 32
S+
Sbjct: 138 SA 139
>AL021571-6|CAN99719.1| 142|Caenorhabditis elegans Hypothetical
protein T19A6.3b protein.
Length = 142
Score = 87.8 bits (208), Expect = 7e-18
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Frame = -3
Query: 385 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVV-----SLTQS 221
DLK FE+RLTEVI + P RWRI + I +V + + + L + +
Sbjct: 18 DLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPMIDMF 77
Query: 220 LWNHPFFAVTSTLLVLLFMI-GVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 44
L H F + + +LLF + GVHR++VAP+I+ R R L+ F++SCD GKLI+KP
Sbjct: 78 LTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKPAV 137
Query: 43 ANSS 32
NS+
Sbjct: 138 RNSA 141
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 670 IRLTIGNLNELVIRLCPAIEILCFVNK*QLAFILHIIDLNLGLFVCLSCLLYIVFTLDLI 491
+RLT L L L L FVNK + +L + +L ++CL YI ++ D +
Sbjct: 363 VRLTFDALKYLTSLLVHRKFALEFVNKGGIPALLKVPKTSLASVGVVTCLYYIAYSND-V 421
Query: 490 MQI 482
M+I
Sbjct: 422 MEI 424
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 670 IRLTIGNLNELVIRLCPAIEILCFVNK*QLAFILHIIDLNLGLFVCLSCLLYIVFTLDLI 491
+RLT L L L L FVNK + +L + +L ++CL YI ++ D +
Sbjct: 363 VRLTFDALKYLTSLLVHRKFALEFVNKGGIPALLKVPKTSLASVGVVTCLYYIAYSND-V 421
Query: 490 MQI 482
M+I
Sbjct: 422 MEI 424
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 104 YGASARCDDARSHYLSMYSNHE*QNQ*CRGHSKKGMIPQ 220
YGA A D+++ + S Y +E CR + ++ PQ
Sbjct: 491 YGAEAAADNSQEYDYSAYGGYEGYLAACRAYDEESQQPQ 529
>Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical
protein F20D1.3 protein.
Length = 463
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 125 DDARSHYLSMYSNHE*QNQ*CRGHSKKGM-IPQRLCERD 238
D+ R H L++ S +Q C G ++GM IP++ C D
Sbjct: 221 DNTRVHLLNLNSPQHITSQNCSGDPQRGMPIPRKQCGFD 259
>Z68493-8|CAA92795.1| 336|Caenorhabditis elegans Hypothetical
protein C33A12.11 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 301 IVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLF 167
I S C +IA HWL L + T PF +L++LF
Sbjct: 99 ISSFCASIAPNHWLKLILFLALYFTYLAMAFPFLVPVVPILIVLF 143
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 516 YSKQLKHT-----NRPKFKSMMCKINASCYLFTKQRISIA 620
Y +++HT N P+F S +C+IN + F Q +IA
Sbjct: 144 YDVRIQHTGHVKVNSPQFVSTLCRINIDLFPFDTQFCAIA 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,521,948
Number of Sequences: 27780
Number of extensions: 291154
Number of successful extensions: 829
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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