Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_C03
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 48 1e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 46 6e-06
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 38 0.001
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 31 0.18
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 27 2.2
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 5.1
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 26 5.1
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 26 6.8
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 26 6.8
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.0
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 9.0
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 765 WCGPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI-ASEYNINSMPTFVFVKNGKKLDE 589
WCGP K I P ++A++ AS + +MPTFVF +NGK++D
Sbjct: 30 WCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDM 89
Query: 588 FSGAN 574
+GAN
Sbjct: 90 LTGAN 94
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -1
Query: 765 WCGPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEF 586
WCGP K I PK ++ + IA+E +++MP+F KNG+K++E
Sbjct: 29 WCGPCKAIAPKFEQFS-NTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEI 87
Query: 585 SGAN 574
GAN
Sbjct: 88 VGAN 91
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 765 WCGPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXI-ASEYNINSMPTFVFVKNGKKLDE 589
WCG K + P+ + A E+ SEY+I PT KNGK++ +
Sbjct: 50 WCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQ 109
Query: 588 FSG 580
+SG
Sbjct: 110 YSG 112
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -1
Query: 765 WCGPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEF 586
W P K + D+ A + A +++N++P FV + K L
Sbjct: 31 WAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDI-AESFDVNAVPLFVLIHGAKVLARI 89
Query: 585 SGAN 574
SGAN
Sbjct: 90 SGAN 93
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 187 IGEIIHLSKPDKNKNKNITIHTLKFLSNHL 276
+G I HL K D+N K ++TL F+ N L
Sbjct: 1251 LGFIHHLKKKDQNMEKVPVLYTLDFIWNTL 1280
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 151 KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTL 255
K DG+ S GE++H + ++ KN+ + I+ L
Sbjct: 301 KLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNL 335
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.1
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +1
Query: 58 RISTALKKTCFYLHNIKKKNIVILVTY---KSF*KH---DGNLSYTLISIGEIIHLSKPD 219
+I L K+ N + ++L+ KSF KH D L ++ S+ ++ KP
Sbjct: 193 QIEIHLSKSSLLGFNAPSPDDIVLMAQSKSKSFQKHKRLDEQLLNSVKSMKKVSQQLKPQ 252
Query: 220 KNKNKNITIHTLKFLSNHLVKKNKI 294
KN N + HTL + L++ +K+
Sbjct: 253 KNTNDSNNDHTL-LSQDQLIELSKL 276
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 414 SSNSLQTLKTFFIYLLKTYTCFFFKF 491
SS +L +F+ L++ + CFFF F
Sbjct: 50 SSGPFISLSFWFLSLVRGFVCFFFMF 75
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 25.8 bits (54), Expect = 6.8
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 338 YLLNCLITTEPIFFAFQRLQTQKINIFKFITDVKNIFYLFIKNVYMFFF*IPFSFHRRLR 517
+ L + E AF+ L T + F + ++ KNI + I ++ F P +++
Sbjct: 795 HFLTSSLLNEQGLTAFEVLMTVWCDNFVYFSNFKNISIICIAMTKIYSFDSPLLDSVQVK 854
Query: 518 TTLVSIYLCLRIVVLSLSTLAPENSS 595
L+S RI+ S S L PE S
Sbjct: 855 GELIS--HSNRIITRSQSKLHPEEYS 878
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 405 KLISSNSLQTLKTFFIYLLKTY 470
KL+SSN+LQ + F+ ++K +
Sbjct: 412 KLVSSNTLQAMSHFYATMIKLF 433
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -1
Query: 762 CGPXKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLD 592
CG K +GP D E A E ++S NI ++PT +NG+ ++
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Query: 591 E 589
E
Sbjct: 114 E 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,649
Number of Sequences: 5004
Number of extensions: 54274
Number of successful extensions: 150
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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