Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_C03
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    59   2e-10
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    24   4.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.8  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 58.8 bits (136), Expect = 2e-10
 Identities = 26/66 (39%), Positives = 38/66 (57%)
 Frame = -1

Query: 765 WCGPXKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXIASEYNINSMPTFVFVKNGKKLDEF 586
           WCGP K+I PKL+E   +                 +A++YNI SMPTF+F+K  + + +F
Sbjct: 31  WCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECEELAAQYNIASMPTFLFIKRKEVVGQF 90

Query: 585 SGANVD 568
           SGAN +
Sbjct: 91  SGANAE 96


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +1

Query: 103 IKKKNIVILVTYKSF*KHDGNLSYTLISIGEIIHLSKPDKNKNKNITIHTLKFLSNHLVK 282
           IKK + VI+  Y +    D + +  ++    II  +KP +NK      H +K L +  V+
Sbjct: 9   IKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIP-TKPLRNKIAGFVTHLMKRLRHSQVR 67

Query: 283 KNKIEIQ 303
              I++Q
Sbjct: 68  GISIKLQ 74


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 151 FKNFCK*QVSQCFFFLCYASRS 86
           F+ FC  +V+  FF  CYA  S
Sbjct: 69  FEGFCIAEVNGVFFCSCYAPPS 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,316
Number of Sequences: 2352
Number of extensions: 12667
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)