Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_B21
(378 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 51 3e-07
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 51 3e-07
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 51 3e-07
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 49 1e-06
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 49 1e-06
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 49 1e-06
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 49 1e-06
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 40 5e-04
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 29 1.6
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 28 2.1
01_01_1106 + 8750597-8754031 28 2.1
05_05_0226 + 23442971-23443857,23444209-23446324 28 2.8
11_06_0050 + 19631164-19631987,19632103-19634023 27 3.7
02_01_0043 + 300122-300907,301447-301722,302347-302481 27 3.7
11_01_0266 - 2010572-2011879 27 6.5
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 27 6.5
11_01_0170 - 1373986-1374013,1374061-1374326,1374693-1374926,137... 26 8.6
07_01_0165 + 1159821-1161362 26 8.6
03_01_0334 - 2634192-2634460,2634571-2634760,2634857-2636071 26 8.6
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 50.8 bits (116), Expect = 3e-07
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQK 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 EGK 132
+ K
Sbjct: 61 KAK 63
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 60 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 49 GYGGQTKPVFHKKAKTTKKIVLKLQC 74
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 50.8 bits (116), Expect = 3e-07
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQK 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 EGK 132
+ K
Sbjct: 61 KAK 63
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 60 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 49 GYGGQTKPVFHKKAKTTKKIVLKLQC 74
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 50.8 bits (116), Expect = 3e-07
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQK 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 EGK 132
+ K
Sbjct: 61 KAK 63
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 60 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 49 GYGGQTKPVFHKKAKTTKKIVLKLQC 74
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKE 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K+
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 GK 132
K
Sbjct: 90 AK 91
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 88 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 77 GYGGQTKPVFHKKAKTTKKIVLKLQC 102
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKE 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K+
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 GK 132
K
Sbjct: 90 AK 91
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 88 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 77 GYGGQTKPVFHKKAKTTKKIVLKLQC 102
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKE 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K+
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 137 GK 132
K
Sbjct: 89 AK 90
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 87 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 76 GYGGQTKPVFHKKAKTTKKIVLKLQC 101
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 48.8 bits (111), Expect = 1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKE 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQSG + K+
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 GK 132
K
Sbjct: 90 AK 91
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1
Query: 141 RRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 88 KKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 33.1 bits (72), Expect = 0.075
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLEC 98
GYGGQ+KP+F KIVL+L+C
Sbjct: 77 GYGGQTKPVFHKKAKTTKKIVLKLQC 102
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1
Query: 132 KPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 16
K +K+ L K SQ +KRCKHF++GGDKK KG
Sbjct: 20 KTTKKIVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 295 SAGRTAKNVNATKYTRYHSTKSPRKGTLPR 206
S+GRTA++ + R+H T RKG LPR
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPR 127
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 241 STKSPRKGTLPRVEDVMIVNS 179
++ SP+K T PRVED M++ S
Sbjct: 451 ASSSPQKQTAPRVEDDMVITS 471
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 184 LRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRC 297
L+S LL C +L+ L DT+C+L +LHFL + RC
Sbjct: 540 LQSLHLLNLKGCGNLEILP-DTICSLQNLHFLN-LSRC 575
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 196 RLLPWAACLSLDFLYCDTLCTLWHLHFLQY 285
R+L C LD + +C LWHL +L +
Sbjct: 595 RVLDLQECSDLDDDHLKYICKLWHLKYLSF 624
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 196 RLLPWAACLSLDFLYCDTLCTLWHLHFLQ 282
R+L ++ C ++ +C +C L+HL +L+
Sbjct: 577 RVLDFSGCDKVENQHCKDICKLFHLRYLR 605
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 14 CPFLFLSPPSSKCLHLFNATCDL 82
CP F SPPSS C F ++ DL
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDL 67
>11_01_0266 - 2010572-2011879
Length = 435
Score = 26.6 bits (56), Expect = 6.5
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -2
Query: 245 SQYKKSKERHAAQGRRRYDRKQSGL 171
S+ +K+++RH A+G+ YD+ + +
Sbjct: 3 SEKRKTRDRHGARGKASYDKPKPSI 27
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 235 KSPRKGTLPRVEDVMIVNSQGYGGQS 158
+SPRKG PR+E + + G+GG +
Sbjct: 18 RSPRKGKAPRIEP-LDADDSGWGGDA 42
>11_01_0170 -
1373986-1374013,1374061-1374326,1374693-1374926,
1375034-1375171,1375255-1375557,1376008-1376172,
1376469-1376933
Length = 532
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 203 RRRYDRKQSGLRWSVQTHLQKEGKNH*ENC 114
+RR RK S R V HL +E N+ E C
Sbjct: 351 KRRPRRKSSVERLKVSKHLAEEAMNYFEEC 380
>07_01_0165 + 1159821-1161362
Length = 513
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 242 QYKKSKERHAAQGRRRYDRKQSGLRWSV 159
Q K +K+R A +G+R Y R+ S L+ V
Sbjct: 340 QGKNNKQRAAVRGKRCYPRRPSHLKLGV 367
>03_01_0334 - 2634192-2634460,2634571-2634760,2634857-2636071
Length = 557
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 75 VISPXQSAHSRRSTIFLVVFAFFLKMGL--D*PP*P*LFTIITSSTLGS 215
++S SA T +V+ F LK+ + PP P L + TSS +GS
Sbjct: 108 IVSAIASALFTNDTCCVVLTEFILKVARQNNLPPQPFLLALATSSNIGS 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,805,457
Number of Sequences: 37544
Number of extensions: 182455
Number of successful extensions: 511
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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