Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_B21
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 56 4e-08
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 56 4e-08
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 56 4e-08
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 56 4e-08
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 56 4e-08
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 56 4e-08
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 56 4e-08
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 55 9e-08
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 55 9e-08
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 55 9e-08
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 55 9e-08
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 55 9e-08
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 55 9e-08
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 55 9e-08
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 55 9e-08
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 55 9e-08
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 44 1e-04
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 33 0.31
CR457190-1|CAG33471.1| 124|Homo sapiens TNFRSF21 protein. 30 2.9
BC015466-1|AAH15466.1| 124|Homo sapiens TNFRSF21 protein protein. 30 2.9
BC005192-1|AAH05192.1| 124|Homo sapiens TNFRSF21 protein protein. 30 2.9
BC111778-1|AAI11779.1| 395|Homo sapiens WD repeat domain 21C pr... 29 5.0
AK093094-1|BAC04051.1| 395|Homo sapiens protein ( Homo sapiens ... 29 5.0
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 54.8 bits (126), Expect = 9e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = -2
Query: 314 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQSGLRWSVQTHLQKEG 135
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQSG + +K+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 134 K 132
K
Sbjct: 61 K 61
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = -1
Query: 144 KRRQKPLRKLCSVLSVLIXKVRSQ--VALKRCKHFELGGDKKRKGQMIQF 1
+++ K +K+ L + RS+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 57 RKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 37.9 bits (84), Expect = 0.011
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3
Query: 175 GYGGQSKPIFXXXXXXXXKIVLRLECAD 92
GYGGQ+KPIF KIVLRLEC +
Sbjct: 47 GYGGQTKPIFRKKAKTTKKIVLRLECVE 74
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein
protein.
Length = 25
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = -1
Query: 72 VALKRCKHFELGGDKKRKGQMIQF 1
+ +KR KHF+LGGDKKRKGQ+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 363 GRCSLTFVDIVPNELKNGERT--KTAQDVLQKM*MPQSTQGITVQKVQGKARCPG 205
G+ L FV+ NEL+ G T K+ ++LQ Q T +TVQKV C G
Sbjct: 248 GKVPLCFVEREANELRRGRSTVTKSIVELLQTTGGIQGTLPLTVQKVLASQACHG 302
>CR457190-1|CAG33471.1| 124|Homo sapiens TNFRSF21 protein.
Length = 124
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 151 WVWTDHRNPDCLRS*RLLPWAACLSLDFLYCDTLCTLW 264
W+ DH DC+ + W C LD+LY LW
Sbjct: 19 WLKLDHTIADCM----VFTWTPCRMLDYLYSSYANMLW 52
>BC015466-1|AAH15466.1| 124|Homo sapiens TNFRSF21 protein protein.
Length = 124
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 151 WVWTDHRNPDCLRS*RLLPWAACLSLDFLYCDTLCTLW 264
W+ DH DC+ + W C LD+LY LW
Sbjct: 19 WLKLDHTIADCM----VFTWTPCRMLDYLYSSYANMLW 52
>BC005192-1|AAH05192.1| 124|Homo sapiens TNFRSF21 protein protein.
Length = 124
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 151 WVWTDHRNPDCLRS*RLLPWAACLSLDFLYCDTLCTLW 264
W+ DH DC+ + W C LD+LY LW
Sbjct: 19 WLKLDHTIADCM----VFTWTPCRMLDYLYSSYANMLW 52
>BC111778-1|AAI11779.1| 395|Homo sapiens WD repeat domain 21C
protein.
Length = 395
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 158 GLTTVTLTVYDHNVFYPGQR---AFPWTFCTVIP--CVLCGIYIFCSTSCAVLV-RSPFL 319
GLTT L VY H Y R + W + +LC + + + SCAVL+ S F+
Sbjct: 106 GLTTPELRVYPHKTLYVPNRKVNSMCWASLNHLDSHLLLCFVGLADTPSCAVLLPASLFI 165
Query: 320 SSF 328
SF
Sbjct: 166 GSF 168
>AK093094-1|BAC04051.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ35775 fis, clone TESTI2005307. ).
Length = 395
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 158 GLTTVTLTVYDHNVFYPGQR---AFPWTFCTVIP--CVLCGIYIFCSTSCAVLV-RSPFL 319
GLTT L VY H Y R + W + +LC + + + SCAVL+ S F+
Sbjct: 106 GLTTPELRVYPHKTLYVPNRKVNSMCWASLNHLDSHLLLCFVGLADTPSCAVLLPASLFI 165
Query: 320 SSF 328
SF
Sbjct: 166 GSF 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,306,124
Number of Sequences: 237096
Number of extensions: 1070430
Number of successful extensions: 2245
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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