Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B15
         (502 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0736 + 35861265-35862047                                         27   6.4  
11_06_0233 + 21565233-21566053,21566840-21567890,21568075-215687...    27   8.5  

>03_06_0736 + 35861265-35862047
          Length = 260

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 289 FFYFIQFYFLSPICCNSGNVKYYLLL 212
           F+Y+  F+FLSP   N     ++LLL
Sbjct: 71  FYYYFFFFFLSPRAINQSIDPHFLLL 96


>11_06_0233 +
           21565233-21566053,21566840-21567890,21568075-21568758,
           21568927-21569019,21571815-21571835
          Length = 889

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 145 CRIYIFVLGLFCMVATIFDRFKKVVDNI 228
           CR++  VL L C++AT  + F K++D +
Sbjct: 493 CRVHDMVLDLICILAT-KENFVKILDRV 519


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,862,563
Number of Sequences: 37544
Number of extensions: 163982
Number of successful extensions: 259
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)