Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B15
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   3.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   4.1  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   5.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.5  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 262 LSPICCNSGNVKYYL 218
           + P  CN+G  KYYL
Sbjct: 402 VDPAGCNAGPAKYYL 416


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -1

Query: 433 ETAHIKMTSKRQLYNKLNLFKGN 365
           +++ I +   +Q+Y +LN ++GN
Sbjct: 492 KSSRINIERMKQVYQQLNKYRGN 514


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 181 YKTNLKQICIFCNSMSFNTYCVLSIEM*YQELHLVPQYNKHE 56
           Y T+  +I IF  ++   +YC+  I + Y    +V     HE
Sbjct: 201 YLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSHVVNHE 242


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 343 ITSV*RIRGKHVSCFLS 293
           +T + R RG HVSC  S
Sbjct: 108 LTQIRRDRGLHVSCSFS 124


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 154 YIFVLGLFCMVATIFDRFKKVV 219
           ++FVLGL   V TI   +  +V
Sbjct: 68  FLFVLGLIVPVFTIVSSYAAIV 89


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 368 TFKQIQFVIKLSFRSHFYMSGFFFTNIM*SY 460
           +F+   F  +  F    Y+SGF  T +  +Y
Sbjct: 217 SFQGPPFTYRYGFSFLLYVSGFITTEVAGTY 247


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,389
Number of Sequences: 438
Number of extensions: 2453
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)