Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B10
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.61 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.9  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   2.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.5  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   9.9  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -2

Query: 472  DDKKKL--FEGDLEKLNKDFLEKVWQERAEQFGGRQKARLP 356
            DDKKK+     DL++  K  L+  W E  E FG      LP
Sbjct: 1008 DDKKKIQAIITDLDEEKKKKLKVAWSEVDENFGSIFSTLLP 1048


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -2

Query: 535 KHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKV 407
           K   + ++ +K  R     S +++ K  +G+L+ LNK   +K+
Sbjct: 368 KEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQIKDKI 410


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 568 KKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFE 449
           K+  D    T K    ++V  +YER   T   D   KLFE
Sbjct: 243 KEAEDTNDKTSKKTTLMEVTGQYERTFITFENDIDNKLFE 282


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 475  YDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 329
            Y     LF+    + NK+   K   +  EQFG + +    KW   R  K
Sbjct: 974  YKQYPHLFKDYFSQYNKN--HKYQNDYYEQFGNKNQEEFQKWSTTRIAK 1020


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 63  YCYYNMNKIFLL 28
           YC Y  NK+FLL
Sbjct: 131 YCNYTSNKLFLL 142


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 99  VASYSFVTNPLTYCYYN 49
           +A  S   NP+TYC+ N
Sbjct: 511 MAYISSCCNPITYCFMN 527


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -1

Query: 557 RPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG*PRETEQ 426
           RP   HRQ   Q     Q  E      LR+Q++  +  PR+ +Q
Sbjct: 242 RPSQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQR-PRQQQQ 284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,082
Number of Sequences: 2352
Number of extensions: 5537
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)