Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_B10
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457199-1|CAG33480.1| 106|Homo sapiens C14orf112 protein. 31 2.3
BC001702-1|AAH01702.1| 106|Homo sapiens chromosome 14 open read... 31 2.3
AF226729-1|AAG09730.1| 106|Homo sapiens PTD019 protein. 31 2.3
M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein. 30 7.2
M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein. 30 7.2
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein. 30 7.2
M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein. 30 7.2
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein. 30 7.2
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein. 30 7.2
BC058001-1|AAH58001.1| 454|Homo sapiens ANKRD11 protein protein. 30 7.2
AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containi... 30 7.2
AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containi... 30 7.2
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 29 9.5
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 29 9.5
>CR457199-1|CAG33480.1| 106|Homo sapiens C14orf112 protein.
Length = 106
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 589 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKL 455
Q+R+ A+K +DPE KI + S+YE+ D++ +DD K +
Sbjct: 38 QIRYDAVKSKMDPELEKKLKENKISLESEYEKIKDSK-FDDWKNI 81
>BC001702-1|AAH01702.1| 106|Homo sapiens chromosome 14 open reading
frame 112 protein.
Length = 106
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 589 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKL 455
Q+R+ A+K +DPE KI + S+YE+ D++ +DD K +
Sbjct: 38 QIRYDAVKSKMDPELEKKLKENKISLESEYEKIKDSK-FDDWKNI 81
>AF226729-1|AAG09730.1| 106|Homo sapiens PTD019 protein.
Length = 106
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 589 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKL 455
Q+R+ A+K +DPE KI + S+YE+ D++ +DD K +
Sbjct: 38 QIRYDAVKSKMDPELEKKLKENKISLESEYEKIKDSK-FDDWKNI 81
>M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein.
Length = 1218
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 590 ATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG*PRETEQG 423
+T QS E + RSA Q S Q R++ RH+ + ++T+RG P + G
Sbjct: 797 STHEQS--ESAHGRSAPSTRRRQGSHHDQARDSSRHSASQEGQDTIRGHPGSSRGG 850
>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 367 PFACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHASRTWTLLEFW 525
PF C+ L T G+PC GH +C+R + +H + L E W
Sbjct: 452 PFGCKSCACNPLGTIPGGNPCDSETGH----CYCKRLVTGQHCDQ--CLPEHW 498
>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 367 PFACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHASRTWTLLEFW 525
PF C+ L T G+PC GH +C+R + +H + L E W
Sbjct: 452 PFGCKSCACNPLGTIPGGNPCDSETGH----CYCKRLVTGQHCDQ--CLPEHW 498
>M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein.
Length = 990
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 590 ATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG*PRETEQG 423
+T QS E + RSA Q S Q R++ RH+ + ++T+RG P + G
Sbjct: 575 STHEQS--ESAHGRSAPSTRRRQGSHHDQARDSSRHSASQEGQDTIRGHPGSSRGG 628
>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 367 PFACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHASRTWTLLEFW 525
PF C+ L T G+PC GH +C+R + +H + L E W
Sbjct: 452 PFGCKSCACNPLGTIPGGNPCDSETGH----CYCKRLVTGQHCDQ--CLPEHW 498
>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
Length = 1786
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 367 PFACRRTVRPSLATPSRGSPCSVSLGHPRTVSFCRRRIVCRHASRTWTLLEFW 525
PF C+ L T G+PC GH +C+R + +H + L E W
Sbjct: 452 PFGCKSCACNPLGTIPGGNPCDSETGH----CYCKRLVTGQHCDQ--CLPEHW 498
>BC058001-1|AAH58001.1| 454|Homo sapiens ANKRD11 protein protein.
Length = 454
Score = 29.9 bits (64), Expect = 7.2
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = -2
Query: 595 KQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKK----KLFEGDLEKLN 428
KQ+L KA KK + KH K ER+ +RS D +K KL E L +
Sbjct: 228 KQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERK-SSRSADAEKSLLEKLEEEALHEYR 286
Query: 427 KDFLEKVWQERAEQFGGRQK-----ARLPKWFGERPGKKK 323
+D +K+ + ++ F R + A L F E PG K
Sbjct: 287 EDSNDKISEVSSDSFTDRGQEPGLTAFLEVSFTEPPGDDK 326
>AY533563-1|AAS45544.1| 2663|Homo sapiens ankyrin repeat-containing
cofactor-1 protein.
Length = 2663
Score = 29.9 bits (64), Expect = 7.2
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = -2
Query: 595 KQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKK----KLFEGDLEKLN 428
KQ+L KA KK + KH K ER+ +RS D +K KL E L +
Sbjct: 1235 KQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERK-SSRSADAEKSLLEKLEEEALHEYR 1293
Query: 427 KDFLEKVWQERAEQFGGRQK-----ARLPKWFGERPGKKK 323
+D +K+ + ++ F R + A L F E PG K
Sbjct: 1294 EDSNDKISEVSSDSFTDRGQEPGLTAFLEVSFTEPPGDDK 1333
>AY373756-1|AAR25661.1| 2664|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2664
Score = 29.9 bits (64), Expect = 7.2
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = -2
Query: 595 KQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKK----KLFEGDLEKLN 428
KQ+L KA KK + KH K ER+ +RS D +K KL E L +
Sbjct: 1236 KQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERK-SSRSADAEKSLLEKLEEEALHEYR 1294
Query: 427 KDFLEKVWQERAEQFGGRQK-----ARLPKWFGERPGKKK 323
+D +K+ + ++ F R + A L F E PG K
Sbjct: 1295 EDSNDKISEVSSDSFTDRGQEPGLTAFLEVSFTEPPGDDK 1334
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 590 ATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG*PRETEQG 423
+T QS R R++ R Q S Q R++ RH+ + ++T+RG P + G
Sbjct: 88 STHEQSESAHGRARTSTRGR--QGSHHEQARDSSRHSTSQEGQDTIRGHPGPSSGG 141
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 29.5 bits (63), Expect = 9.5
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -1
Query: 590 ATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREACRHTILRRQKETVRG*PRETEQG 423
+T QS R R++ + Q S Q R++ RH+ + ++T+RG P + +G
Sbjct: 3391 STHEQSESAHGRTRTSTGRR--QGSHHEQARDSSRHSASQEGQDTIRGHPGSSRRG 3444
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,182,363
Number of Sequences: 237096
Number of extensions: 899912
Number of successful extensions: 6064
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6058
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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