Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B07
         (578 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0144 - 1316626-1316658,1317580-1318863                           29   3.5  
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138...    28   6.2  
01_02_0039 - 10490522-10490606,10490674-10490810,10491107-104912...    28   6.2  
01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206           28   6.2  

>01_01_0144 - 1316626-1316658,1317580-1318863
          Length = 438

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 91  IQSTYLNIVTVYLHKCFMLY 32
           I  T+  IV +Y H+C++LY
Sbjct: 99  ISGTHKGIVVIYAHRCYLLY 118


>05_07_0145 +
           28012268-28012624,28012734-28012794,28013758-28013852,
           28013944-28014056,28014436-28014604,28014677-28014716,
           28014797-28014861,28015485-28015598,28015687-28015751,
           28015927-28016083,28016167-28016286,28016447-28016535,
           28016631-28016715
          Length = 509

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = -1

Query: 434 CYSASACRRFSLYKNMCLQTFER**TVYYIRMGKYHYAAYFCSETALKGAIEVNNRHYDL 255
           CY + AC   S YK+    T+++      I+ G    A +F  ++   G + V ++ +  
Sbjct: 116 CYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIE 175

Query: 254 TLKADGDTHIV 222
             K  G T +V
Sbjct: 176 ATKEPGLTFMV 186


>01_02_0039 -
           10490522-10490606,10490674-10490810,10491107-10491248,
           10491355-10491419,10491528-10491641,10491846-10492119,
           10492215-10492327,10492405-10492499,10492602-10492662,
           10492774-10493103
          Length = 471

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/71 (23%), Positives = 31/71 (43%)
 Frame = -1

Query: 434 CYSASACRRFSLYKNMCLQTFER**TVYYIRMGKYHYAAYFCSETALKGAIEVNNRHYDL 255
           CY + AC     YK+    ++++      I  G    A +F  ++ L G + V N+ +  
Sbjct: 107 CYFSIACYLHHRYKSKGSSSYKKNGESCSISYGSGSIAGFFSEDSVLVGDLAVKNQMFIE 166

Query: 254 TLKADGDTHIV 222
           T +    T I+
Sbjct: 167 TTREPSLTFII 177


>01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206
          Length = 584

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 91  IQSTYLNIVTVYLHKCFMLY 32
           I ST+  IV +Y  KC++LY
Sbjct: 100 ISSTHKGIVVIYADKCYLLY 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,750,352
Number of Sequences: 37544
Number of extensions: 230489
Number of successful extensions: 427
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)