Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B05
         (325 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0771 + 5917550-5917829,5918390-5918526,5918617-5918742,591...    35   0.013

>07_01_0771 +
           5917550-5917829,5918390-5918526,5918617-5918742,
           5919168-5919221,5919344-5919457,5919895-5919950,
           5920017-5920058,5920580-5920655,5920765-5920836,
           5920908-5921033,5921117-5921221,5921333-5921416,
           5921636-5921683
          Length = 439

 Score = 35.1 bits (77), Expect = 0.013
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYK 248
           YY +SFS M   F+FSFV+LY+K
Sbjct: 417 YYAASFSTMGAFFIFSFVYLYHK 439


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,128,105
Number of Sequences: 37544
Number of extensions: 80015
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)