Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_pT_B05
         (325 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002594-1|AAH02594.1|  456|Homo sapiens dolichyl-diphosphooligo...    41   7e-04
AL391357-10|CAH73476.1|  456|Homo sapiens dolichyl-diphosphoolig...    41   7e-04
AB062391-1|BAB93478.1|  439|Homo sapiens dolichyl-diphosphooligo...    41   7e-04
D89060-1|BAA23670.1|  456|Homo sapiens oligosaccharyltransferase...    39   0.003
D29643-1|BAA06126.1|  456|Homo sapiens KIAA0115 protein.               39   0.003
BC014983-1|AAH14983.1|  403|Homo sapiens TBC1D20 protein protein.      27   9.8  
AL121747-1|CAI23015.1|  403|Homo sapiens TBC1 domain family, mem...    27   9.8  
AL049761-1|CAI23048.1|  403|Homo sapiens TBC1 domain family, mem...    27   9.8  
AK127062-1|BAC86808.1|  428|Homo sapiens protein ( Homo sapiens ...    27   9.8  

>BC002594-1|AAH02594.1|  456|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 456

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYKEDQ 239
           YY S+FSMM+G+F+FS VFL+ KE +
Sbjct: 428 YYASAFSMMLGLFIFSIVFLHMKEKE 453


>AL391357-10|CAH73476.1|  456|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 456

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYKEDQ 239
           YY S+FSMM+G+F+FS VFL+ KE +
Sbjct: 428 YYASAFSMMLGLFIFSIVFLHMKEKE 453


>AB062391-1|BAB93478.1|  439|Homo sapiens
           dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase protein.
          Length = 439

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYKEDQ 239
           YY S+FSMM+G+F+FS VFL+ KE +
Sbjct: 411 YYASAFSMMLGLFIFSIVFLHMKEKE 436


>D89060-1|BAA23670.1|  456|Homo sapiens oligosaccharyltransferase
           protein.
          Length = 456

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYKEDQ 239
           YY S+F MM+G+F+FS VFL+ KE +
Sbjct: 428 YYASAFPMMLGLFIFSIVFLHMKEKE 453


>D29643-1|BAA06126.1|  456|Homo sapiens KIAA0115 protein.
          Length = 456

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = -1

Query: 316 YYVSSFSMMIGVFLFSFVFLYYKEDQ 239
           YY S+F MM+G+F+FS VFL+ KE +
Sbjct: 428 YYASAFPMMLGLFIFSIVFLHMKEKE 453


>BC014983-1|AAH14983.1|  403|Homo sapiens TBC1D20 protein protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 137 CDMADVHHLLTQ 172
           CDMA VHHLL+Q
Sbjct: 270 CDMASVHHLLSQ 281


>AL121747-1|CAI23015.1|  403|Homo sapiens TBC1 domain family, member
           20 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 137 CDMADVHHLLTQ 172
           CDMA VHHLL+Q
Sbjct: 270 CDMASVHHLLSQ 281


>AL049761-1|CAI23048.1|  403|Homo sapiens TBC1 domain family, member
           20 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 137 CDMADVHHLLTQ 172
           CDMA VHHLL+Q
Sbjct: 270 CDMASVHHLLSQ 281


>AK127062-1|BAC86808.1|  428|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45119 fis, clone BRAWH3035914. ).
          Length = 428

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 137 CDMADVHHLLTQ 172
           CDMA VHHLL+Q
Sbjct: 295 CDMASVHHLLSQ 306


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,456,476
Number of Sequences: 237096
Number of extensions: 450887
Number of successful extensions: 479
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)