Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_pT_B03
(302 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075548-1|AAL68355.1| 73|Drosophila melanogaster RH49308p pro... 81 3e-16
AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p pro... 49 1e-06
AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protei... 49 1e-06
AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-P... 49 1e-06
AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-P... 49 1e-06
AY118745-1|AAM50605.1| 396|Drosophila melanogaster GH05812p pro... 28 2.6
AF038584-1|AAB97004.1| 396|Drosophila melanogaster QKR58E-1 pro... 28 2.6
AE013599-3394|AAF46844.1| 396|Drosophila melanogaster CG3613-PA... 28 2.6
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 27 4.6
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 27 4.6
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 27 4.6
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 26 8.0
>AY075548-1|AAL68355.1| 73|Drosophila melanogaster RH49308p
protein.
Length = 73
Score = 80.6 bits (190), Expect = 3e-16
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = -2
Query: 235 MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWXRALXQRDMRLTGXPYE 56
MW+EILP IIT + +P + +Y + L +GN +RR++ +R+ R + QRD RLT PY+
Sbjct: 1 MWFEILPGAVIITTLLSVPIYAMYGLDKLMIGNAFRRNMNERFSRVMYQRDFRLTDNPYK 60
Query: 55 VNGLEAIPD 29
+NGL+AIPD
Sbjct: 61 MNGLDAIPD 69
>AY061306-1|AAL28854.1| 743|Drosophila melanogaster LD22256p
protein.
Length = 743
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 133 YRRSLTDRWXRALXQRDMRLTGXPYEVNGLEAIPD 29
+RR++ +R+ R + QRD RLT PY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739
>AJ635208-1|CAG25590.1| 1153|Drosophila melanogaster CAP-G protein
protein.
Length = 1153
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 133 YRRSLTDRWXRALXQRDMRLTGXPYEVNGLEAIPD 29
+RR++ +R+ R + QRD RLT PY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149
>AE013599-1638|AAS64861.1| 743|Drosophila melanogaster CG17054-PE,
isoform E protein.
Length = 743
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 133 YRRSLTDRWXRALXQRDMRLTGXPYEVNGLEAIPD 29
+RR++ +R+ R + QRD RLT PY++NGL+AIPD
Sbjct: 705 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 739
>AE013599-1634|AAF58425.4| 1153|Drosophila melanogaster CG17054-PA,
isoform A protein.
Length = 1153
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = -2
Query: 133 YRRSLTDRWXRALXQRDMRLTGXPYEVNGLEAIPD 29
+RR++ +R+ R + QRD RLT PY++NGL+AIPD
Sbjct: 1115 FRRNMDERFSRVMYQRDFRLTDNPYKMNGLDAIPD 1149
>AY118745-1|AAM50605.1| 396|Drosophila melanogaster GH05812p
protein.
Length = 396
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 188 NSSSYNEKTRKNFVPHYSKFSYPKLHKCFRSIGRPNS 298
+SSSY R+ + PH S SY + S GR +S
Sbjct: 322 DSSSYERDYRREYHPHSSSSSYAAAYPAKPSNGRSSS 358
>AF038584-1|AAB97004.1| 396|Drosophila melanogaster QKR58E-1
protein.
Length = 396
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 188 NSSSYNEKTRKNFVPHYSKFSYPKLHKCFRSIGRPNS 298
+SSSY R+ + PH S SY + S GR +S
Sbjct: 322 DSSSYERDYRREYHPHSSSSSYAAAYPAKPSNGRSSS 358
>AE013599-3394|AAF46844.1| 396|Drosophila melanogaster CG3613-PA
protein.
Length = 396
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 188 NSSSYNEKTRKNFVPHYSKFSYPKLHKCFRSIGRPNS 298
+SSSY R+ + PH S SY + S GR +S
Sbjct: 322 DSSSYERDYRREYHPHSSSSSYAAAYPAKPSNGRSSS 358
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 185 TNSSSYNEKTRKNFVPHYSKFSYPKLHK 268
TN + + T+ N +P YSK+SYP+ ++
Sbjct: 194 TNQTKHTINTKHN-LPLYSKYSYPQAYE 220
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire
protein.
Length = 5233
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 183 RPTAAVIMKKLGRISYHIILNSRIPSYTSVFVPSAGRI 296
R AV KK+ +I H+++++ + TS FV G++
Sbjct: 691 RQPKAVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKL 728
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 183 RPTAAVIMKKLGRISYHIILNSRIPSYTSVFVPSAGRI 296
R AV KK+ +I H+++++ + TS FV G++
Sbjct: 691 RQPKAVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKL 728
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 152 IMYMIKTPAR*TNSSSYNEKTRKNFVPHYSKFSYPKLHK 268
I Y +TP TN +++ T N H + YP +HK
Sbjct: 291 IFYNPETPLTFTNKITHSIPTIDNTPIHTKSYRYPFVHK 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,534,716
Number of Sequences: 53049
Number of extensions: 209570
Number of successful extensions: 396
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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